RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 SMARCC1Q92922 1105 aaPredicted RBP11.96□□□□□ -0.49
CDK4-213ENST00000552713 SBF1O95248 1867 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 ARFGEF1Q9Y6D6 1849 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 SSFA2P28290 1259 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 SIK1P57059 783 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
CDK4-213ENST00000552713 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
CDK4-213ENST00000552713 APLP1P51693 650 aa11.94□□□□□ -0.5
CDK4-213ENST00000552713 NMRK2Q9NPI5 230 aa11.94□□□□□ -0.5
CDK4-213ENST00000552713 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
CDK4-213ENST00000552713 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
CDK4-213ENST00000552713 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
CDK4-213ENST00000552713 FLT4P35916 1363 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 A0A0G2JLW4 131 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 GNPATO15228 680 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 MMP10P09238 476 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 HTRA3P83110 453 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CDK4-213ENST00000552713 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 NSD3Q9BZ95 1437 aa11.93□□□□□ -0.5
CDK4-213ENST00000552713 TOMM70O94826 608 aa11.92□□□□□ -0.5
CDK4-213ENST00000552713 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
CDK4-213ENST00000552713 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
CDK4-213ENST00000552713 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
CDK4-213ENST00000552713 DPEP1P16444 411 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
CDK4-213ENST00000552713 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 TMOD3Q9NYL9 352 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 ZNF831Q5JPB2 1677 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
CDK4-213ENST00000552713 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
CDK4-213ENST00000552713 KDRP35968 1356 aa11.89□□□□□ -0.51
CDK4-213ENST00000552713 KIF24Q5T7B8 1368 aa11.89□□□□□ -0.51
CDK4-213ENST00000552713 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
CDK4-213ENST00000552713 KCNA3P22001 575 aa11.88□□□□□ -0.51
CDK4-213ENST00000552713 TGFB2P61812 414 aa11.88□□□□□ -0.51
CDK4-213ENST00000552713 EYA1Q99502 592 aa11.88□□□□□ -0.51
CDK4-213ENST00000552713 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
CDK4-213ENST00000552713 KCPQ6ZWJ8 1503 aa11.87□□□□□ -0.51
CDK4-213ENST00000552713 FCHSD2O94868 740 aa11.87□□□□□ -0.51
CDK4-213ENST00000552713 PHKG2P15735 406 aa11.87□□□□□ -0.51
CDK4-213ENST00000552713 TMF1P82094 1093 aa11.87□□□□□ -0.51
CDK4-213ENST00000552713 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
CDK4-213ENST00000552713 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
CDK4-213ENST00000552713 GYS1P13807 737 aa11.86□□□□□ -0.51
CDK4-213ENST00000552713 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
CDK4-213ENST00000552713 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
CDK4-213ENST00000552713 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
CDK4-213ENST00000552713 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
CDK4-213ENST00000552713 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
CDK4-213ENST00000552713 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
CDK4-213ENST00000552713 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
CDK4-213ENST00000552713 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
CDK4-213ENST00000552713 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
CDK4-213ENST00000552713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK4-213ENST00000552713 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
CDK4-213ENST00000552713 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
CDK4-213ENST00000552713 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
CDK4-213ENST00000552713 ADAMTS7Q9UKP4 1686 aa11.84□□□□□ -0.51
CDK4-213ENST00000552713 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
CDK4-213ENST00000552713 TJP1Q07157 1748 aa11.84□□□□□ -0.51
CDK4-213ENST00000552713 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
CDK4-213ENST00000552713 RPS6KA4O75676 772 aa11.83□□□□□ -0.52
CDK4-213ENST00000552713 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
CDK4-213ENST00000552713 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
CDK4-213ENST00000552713 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
CDK4-213ENST00000552713 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 RFC4P35249 363 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 DDR1Q08345 913 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
CDK4-213ENST00000552713 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
CDK4-213ENST00000552713 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
CDK4-213ENST00000552713 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 CHRNA5P30532 468 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 FSTL1Q12841 308 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
CDK4-213ENST00000552713 FKBP8Q14318 412 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 C16orf71Q8IYS4 520 aaPredicted RBP11.81□□□□□ -0.52
CDK4-213ENST00000552713 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 PIM2Q9P1W9 311 aa11.81□□□□□ -0.52
CDK4-213ENST00000552713 SCN11AQ9UI33 1791 aa11.8□□□□□ -0.52
CDK4-213ENST00000552713 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
CDK4-213ENST00000552713 TIAM2Q8IVF5 1701 aa11.8□□□□□ -0.52
CDK4-213ENST00000552713 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
CDK4-213ENST00000552713 PRELPP51888 382 aa11.79□□□□□ -0.52
CDK4-213ENST00000552713 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
CDK4-213ENST00000552713 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
CDK4-213ENST00000552713 TNNT2P45379 298 aaPredicted RBP11.78□□□□□ -0.52
CDK4-213ENST00000552713 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
CDK4-213ENST00000552713 RASSF7Q02833 373 aa11.78□□□□□ -0.52
CDK4-213ENST00000552713 TNS4Q8IZW8 715 aa11.78□□□□□ -0.52
CDK4-213ENST00000552713 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms