RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
PRIM1-208ENST00000552590 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
PRIM1-208ENST00000552590 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
PRIM1-208ENST00000552590 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
PRIM1-208ENST00000552590 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
PRIM1-208ENST00000552590 CPDO75976 1380 aa12.66□□□□□ -0.38
PRIM1-208ENST00000552590 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
PRIM1-208ENST00000552590 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
PRIM1-208ENST00000552590 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
PRIM1-208ENST00000552590 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
PRIM1-208ENST00000552590 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
PRIM1-208ENST00000552590 POGKQ9P215 609 aa12.65□□□□□ -0.38
PRIM1-208ENST00000552590 QSER1Q2KHR3 1735 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 ANKRD30BQ9BXX2 1392 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 ZBTB7CA1YPR0 619 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
PRIM1-208ENST00000552590 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
PRIM1-208ENST00000552590 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
PRIM1-208ENST00000552590 NLRP6P59044 892 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
PRIM1-208ENST00000552590 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 NHSQ6T4R5 1651 aa12.62□□□□□ -0.39
PRIM1-208ENST00000552590 PIK3C2GO75747 1445 aa12.61□□□□□ -0.39
PRIM1-208ENST00000552590 FSTL1Q12841 308 aa12.61□□□□□ -0.39
PRIM1-208ENST00000552590 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
PRIM1-208ENST00000552590 BTAF1O14981 1849 aa12.6□□□□□ -0.39
PRIM1-208ENST00000552590 EXOC5O00471 708 aa12.6□□□□□ -0.39
PRIM1-208ENST00000552590 GCP02774 474 aa12.6□□□□□ -0.39
PRIM1-208ENST00000552590 ITGAEP38570 1179 aa12.6□□□□□ -0.39
PRIM1-208ENST00000552590 PSEN2P49810 448 aa12.6□□□□□ -0.39
PRIM1-208ENST00000552590 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
PRIM1-208ENST00000552590 CDCA7Q9BWT1 371 aaPredicted RBP12.6□□□□□ -0.39
PRIM1-208ENST00000552590 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
PRIM1-208ENST00000552590 KCNQ4P56696 695 aa12.59□□□□□ -0.39
PRIM1-208ENST00000552590 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
PRIM1-208ENST00000552590 USP6P35125 1406 aa12.59□□□□□ -0.39
PRIM1-208ENST00000552590 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
PRIM1-208ENST00000552590 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
PRIM1-208ENST00000552590 USP19O94966 1318 aa12.58□□□□□ -0.39
PRIM1-208ENST00000552590 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.39
PRIM1-208ENST00000552590 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
PRIM1-208ENST00000552590 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
PRIM1-208ENST00000552590 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
PRIM1-208ENST00000552590 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
PRIM1-208ENST00000552590 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
PRIM1-208ENST00000552590 PTPN5P54829 565 aa12.57□□□□□ -0.4
PRIM1-208ENST00000552590 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
PRIM1-208ENST00000552590 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
PRIM1-208ENST00000552590 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
PRIM1-208ENST00000552590 MLLT1Q03111 559 aaPredicted RBP12.55□□□□□ -0.4
PRIM1-208ENST00000552590 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
PRIM1-208ENST00000552590 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
PRIM1-208ENST00000552590 NUDT16Q96DE0 195 aaKnown RBP12.53□□□□□ -0.4
PRIM1-208ENST00000552590 ACEP12821 1306 aa12.53□□□□□ -0.4
PRIM1-208ENST00000552590 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
PRIM1-208ENST00000552590 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.4
PRIM1-208ENST00000552590 FOXN1O15353 648 aa12.52□□□□□ -0.41
PRIM1-208ENST00000552590 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
PRIM1-208ENST00000552590 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
PRIM1-208ENST00000552590 ITSN1Q15811 1721 aa12.52□□□□□ -0.41
PRIM1-208ENST00000552590 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
PRIM1-208ENST00000552590 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
PRIM1-208ENST00000552590 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
PRIM1-208ENST00000552590 COL18A1P39060 1754 aa12.51□□□□□ -0.41
PRIM1-208ENST00000552590 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
PRIM1-208ENST00000552590 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
PRIM1-208ENST00000552590 PRDM10Q9NQV6 1147 aa12.5□□□□□ -0.41
PRIM1-208ENST00000552590 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
PRIM1-208ENST00000552590 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
PRIM1-208ENST00000552590 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
PRIM1-208ENST00000552590 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
PRIM1-208ENST00000552590 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 Q6ZNB5 142 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 ABCC6O95255 1503 aa12.47□□□□□ -0.41
PRIM1-208ENST00000552590 RGS19P49795 217 aa12.46□□□□□ -0.41
PRIM1-208ENST00000552590 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
PRIM1-208ENST00000552590 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
PRIM1-208ENST00000552590 CCDC85CA6NKD9 419 aa12.45□□□□□ -0.42
PRIM1-208ENST00000552590 C9orf131Q5VYM1 1079 aa12.45□□□□□ -0.42
PRIM1-208ENST00000552590 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
PRIM1-208ENST00000552590 CCDC7Q96M83 1385 aa12.44□□□□□ -0.42
PRIM1-208ENST00000552590 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
PRIM1-208ENST00000552590 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
PRIM1-208ENST00000552590 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
PRIM1-208ENST00000552590 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
PRIM1-208ENST00000552590 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
PRIM1-208ENST00000552590 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
PRIM1-208ENST00000552590 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
PRIM1-208ENST00000552590 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
PRIM1-208ENST00000552590 VPS9D1Q9Y2B5 631 aa12.43□□□□□ -0.42
PRIM1-208ENST00000552590 LBX1P52954 281 aa12.42□□□□□ -0.42
PRIM1-208ENST00000552590 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms