RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PKD1L3Q7Z443 1732 aa14.66□□□□□ -0.06
TMEM116-215ENST00000552374 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
TMEM116-215ENST00000552374 MSL1Q68DK7 614 aa14.65□□□□□ -0.06
TMEM116-215ENST00000552374 KLHL34Q8N239 644 aa14.65□□□□□ -0.06
TMEM116-215ENST00000552374 FLAD1Q8NFF5 587 aa14.65□□□□□ -0.06
TMEM116-215ENST00000552374 SYT17Q9BSW7 474 aa14.65□□□□□ -0.06
TMEM116-215ENST00000552374 RNMTO43148 476 aaKnown RBP14.64□□□□□ -0.07
TMEM116-215ENST00000552374 DDX10Q13206 875 aaKnown RBP14.64□□□□□ -0.07
TMEM116-215ENST00000552374 AMIGO3Q86WK7 504 aa14.64□□□□□ -0.07
TMEM116-215ENST00000552374 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
TMEM116-215ENST00000552374 KDM6AO15550 1401 aaPredicted RBP14.63□□□□□ -0.07
TMEM116-215ENST00000552374 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
TMEM116-215ENST00000552374 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■□□□ 12.9
TMEM116-215ENST00000552374 SLC4A9Q96Q91 983 aa14.63□□□□□ -0.07
TMEM116-215ENST00000552374 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
TMEM116-215ENST00000552374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.62□□□□□ -0.07
TMEM116-215ENST00000552374 GNPATO15228 680 aa14.62□□□□□ -0.07
TMEM116-215ENST00000552374 SLC52A2Q9HAB3 445 aa14.62□□□□□ -0.07
TMEM116-215ENST00000552374 PRKAR2BP31323 418 aa14.61□□□□□ -0.07
TMEM116-215ENST00000552374 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
TMEM116-215ENST00000552374 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
TMEM116-215ENST00000552374 GAS2L2Q8NHY3 880 aa14.6□□□□□ -0.07
TMEM116-215ENST00000552374 PHACTR3Q96KR7 559 aa14.6□□□□□ -0.07
TMEM116-215ENST00000552374 LY75O60449 1722 aa14.6□□□□□ -0.07
TMEM116-215ENST00000552374 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
TMEM116-215ENST00000552374 SSFA2P28290 1259 aa14.59□□□□□ -0.07
TMEM116-215ENST00000552374 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
TMEM116-215ENST00000552374 RTCBQ9Y3I0 505 aaKnown RBP14.59□□□□□ -0.07
TMEM116-215ENST00000552374 TRAPPC3LQ5T215 181 aa14.58□□□□□ -0.07
TMEM116-215ENST00000552374 ITGB4P16144 1822 aa14.58□□□□□ -0.07
TMEM116-215ENST00000552374 COL3A1P02461 1466 aaPredicted RBP14.58□□□□□ -0.08
TMEM116-215ENST00000552374 FCHSD2O94868 740 aa14.58□□□□□ -0.08
TMEM116-215ENST00000552374 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
TMEM116-215ENST00000552374 IL17REQ8NFR9 667 aa14.58□□□□□ -0.08
TMEM116-215ENST00000552374 UTRNP46939 3433 aa14.57□□□□□ -0.08
TMEM116-215ENST00000552374 TEFQ10587 303 aa14.57□□□□□ -0.08
TMEM116-215ENST00000552374 RPS6KA4O75676 772 aa14.56□□□□□ -0.08
TMEM116-215ENST00000552374 RFC4P35249 363 aa14.55□□□□□ -0.08
TMEM116-215ENST00000552374 CRKLP46109 303 aaKnown RBP14.55□□□□□ -0.08
TMEM116-215ENST00000552374 GPR162Q16538 588 aa14.55□□□□□ -0.08
TMEM116-215ENST00000552374 DNAJC10Q8IXB1 793 aa14.55□□□□□ -0.08
TMEM116-215ENST00000552374 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
TMEM116-215ENST00000552374 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
TMEM116-215ENST00000552374 ARHGEF1Q92888 912 aaKnown RBP14.55□□□□□ -0.08
TMEM116-215ENST00000552374 RALBP1Q15311 655 aa14.54□□□□□ -0.08
TMEM116-215ENST00000552374 NLGN2Q8NFZ4 835 aa14.54□□□□□ -0.08
TMEM116-215ENST00000552374 RTF1Q92541 710 aaKnown RBP14.54□□□□□ -0.08
TMEM116-215ENST00000552374 MAP3K5Q99683 1374 aa14.54□□□□□ -0.08
TMEM116-215ENST00000552374 CNTNAP4Q9C0A0 1308 aa14.53□□□□□ -0.08
TMEM116-215ENST00000552374 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-215ENST00000552374 C4BP0C0L5 1744 aa14.53□□□□□ -0.08
TMEM116-215ENST00000552374 C5P01031 1676 aa14.53□□□□□ -0.08
TMEM116-215ENST00000552374 NEFMP07197 916 aa14.52□□□□□ -0.08
TMEM116-215ENST00000552374 ADRA2BP18089 450 aa14.52□□□□□ -0.08
TMEM116-215ENST00000552374 YY1P25490 414 aa14.52□□□□□ -0.08
TMEM116-215ENST00000552374 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.08
TMEM116-215ENST00000552374 MCM10Q7L590 875 aa14.51□□□□□ -0.09
TMEM116-215ENST00000552374 GOLGB1Q14789 3259 aaKnown RBP14.5□□□□□ -0.09
TMEM116-215ENST00000552374 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 MMP10P09238 476 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 CYP19A1P11511 503 aaPredicted RBP14.5□□□□□ -0.09
TMEM116-215ENST00000552374 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
TMEM116-215ENST00000552374 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
TMEM116-215ENST00000552374 ZNF496Q96IT1 587 aaPredicted RBP14.49□□□□□ -0.09
TMEM116-215ENST00000552374 CD2APQ9Y5K6 639 aa14.49□□□□□ -0.09
TMEM116-215ENST00000552374 KCNQ3O43525 872 aa14.49□□□□□ -0.09
TMEM116-215ENST00000552374 GYS1P13807 737 aa14.49□□□□□ -0.09
TMEM116-215ENST00000552374 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
TMEM116-215ENST00000552374 SRP68Q9UHB9 627 aaKnown RBP14.49□□□□□ -0.09
TMEM116-215ENST00000552374 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
TMEM116-215ENST00000552374 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
TMEM116-215ENST00000552374 ZPR1O75312 459 aa14.48□□□□□ -0.09
TMEM116-215ENST00000552374 STARD3NLO95772 234 aa14.48□□□□□ -0.09
TMEM116-215ENST00000552374 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
TMEM116-215ENST00000552374 QSER1Q2KHR3 1735 aa14.48□□□□□ -0.09
TMEM116-215ENST00000552374 HTATSF1O43719 755 aaKnown RBP14.47□□□□□ -0.09
TMEM116-215ENST00000552374 FMNL2Q96PY5 1086 aa14.47□□□□□ -0.09
TMEM116-215ENST00000552374 PLEKHF1Q96S99 279 aa14.47□□□□□ -0.09
TMEM116-215ENST00000552374 WWC3Q9ULE0 1092 aa14.47□□□□□ -0.09
TMEM116-215ENST00000552374 ZBTB1Q9Y2K1 713 aa14.47□□□□□ -0.09
TMEM116-215ENST00000552374 PARP3Q9Y6F1 533 aa14.47□□□□□ -0.09
TMEM116-215ENST00000552374 CEMIPQ8WUJ3 1361 aa14.46□□□□□ -0.09
TMEM116-215ENST00000552374 FKBP8Q14318 412 aa14.46□□□□□ -0.09
TMEM116-215ENST00000552374 TEX13AQ9BXU3 409 aaPredicted RBP14.46□□□□□ -0.09
TMEM116-215ENST00000552374 MIS18AQ9NYP9 233 aa14.46□□□□□ -0.09
TMEM116-215ENST00000552374 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.1
TMEM116-215ENST00000552374 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.1
TMEM116-215ENST00000552374 TAF7Q15545 349 aaPredicted RBP14.45□□□□□ -0.1
TMEM116-215ENST00000552374 ZNF330Q9Y3S2 320 aaPredicted RBP14.45□□□□□ -0.1
TMEM116-215ENST00000552374 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
TMEM116-215ENST00000552374 MRC1P22897 1456 aa14.45□□□□□ -0.1
TMEM116-215ENST00000552374 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
TMEM116-215ENST00000552374 HEG1Q9ULI3 1381 aa14.44□□□□□ -0.1
TMEM116-215ENST00000552374 A1BGP04217 495 aa14.44□□□□□ -0.1
TMEM116-215ENST00000552374 YBX3P16989 372 aaKnown RBP eCLIP14.44□□□□□ -0.16e-6■□□□□ 10.9
TMEM116-215ENST00000552374 NFE2L2Q16236 605 aa14.44□□□□□ -0.1
TMEM116-215ENST00000552374 USPL1Q5W0Q7 1092 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 422.9 ms