RNA–Protein interactions for RNA: ENST00000552239.1

TMCC3-204, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 4

Gene TMCC3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-204ENST00000552239 LINC00116Q8NCU8 138 aa14.89□□□□□ -0.03
TMCC3-204ENST00000552239 SLC4A9Q96Q91 983 aa14.89□□□□□ -0.03
TMCC3-204ENST00000552239 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
TMCC3-204ENST00000552239 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
TMCC3-204ENST00000552239 AKAP4Q5JQC9 854 aa14.88□□□□□ -0.03
TMCC3-204ENST00000552239 MSL1Q68DK7 614 aa14.88□□□□□ -0.03
TMCC3-204ENST00000552239 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
TMCC3-204ENST00000552239 PHF14O94880 888 aa14.87□□□□□ -0.03
TMCC3-204ENST00000552239 SLC16A10Q8TF71 515 aa14.87□□□□□ -0.03
TMCC3-204ENST00000552239 AK7Q96M32 723 aa14.87□□□□□ -0.03
TMCC3-204ENST00000552239 ARXQ96QS3 562 aa14.87□□□□□ -0.03
TMCC3-204ENST00000552239 SCN11AQ9UI33 1791 aa14.87□□□□□ -0.03
TMCC3-204ENST00000552239 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
TMCC3-204ENST00000552239 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
TMCC3-204ENST00000552239 VIRMAQ69YN4 1812 aaKnown RBP14.85□□□□□ -0.03
TMCC3-204ENST00000552239 RNMTO43148 476 aaKnown RBP14.85□□□□□ -0.03
TMCC3-204ENST00000552239 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
TMCC3-204ENST00000552239 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
TMCC3-204ENST00000552239 SYT17Q9BSW7 474 aa14.85□□□□□ -0.03
TMCC3-204ENST00000552239 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
TMCC3-204ENST00000552239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.84□□□□□ -0.03
TMCC3-204ENST00000552239 POLD1P28340 1107 aa14.84□□□□□ -0.03
TMCC3-204ENST00000552239 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
TMCC3-204ENST00000552239 GNPATO15228 680 aa14.83□□□□□ -0.04
TMCC3-204ENST00000552239 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
TMCC3-204ENST00000552239 SLC39A6Q13433 755 aa14.83□□□□□ -0.04
TMCC3-204ENST00000552239 SLC52A2Q9HAB3 445 aa14.83□□□□□ -0.04
TMCC3-204ENST00000552239 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.04
TMCC3-204ENST00000552239 U2AF1L5P0DN76 240 aaPredicted RBP14.82□□□□□ -0.04
TMCC3-204ENST00000552239 U2AF1Q01081 240 aaKnown RBP eCLIP14.82□□□□□ -0.04
TMCC3-204ENST00000552239 FLAD1Q8NFF5 587 aa14.82□□□□□ -0.04
TMCC3-204ENST00000552239 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
TMCC3-204ENST00000552239 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
TMCC3-204ENST00000552239 HMGB2P26583 209 aaKnown RBP14.81□□□□□ -0.04
TMCC3-204ENST00000552239 SSFA2P28290 1259 aa14.8□□□□□ -0.04
TMCC3-204ENST00000552239 IL17REQ8NFR9 667 aa14.8□□□□□ -0.04
TMCC3-204ENST00000552239 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
TMCC3-204ENST00000552239 GNAT3A8MTJ3 354 aa14.79□□□□□ -0.04
TMCC3-204ENST00000552239 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
TMCC3-204ENST00000552239 GAS2L2Q8NHY3 880 aa14.79□□□□□ -0.04
TMCC3-204ENST00000552239 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 ADAMTS7Q9UKP4 1686 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 MRC1P22897 1456 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 MAP3K5Q99683 1374 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 DNAJC10Q8IXB1 793 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 NLGN2Q8NFZ4 835 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 RTCBQ9Y3I0 505 aaKnown RBP14.78□□□□□ -0.04
TMCC3-204ENST00000552239 TJP1Q07157 1748 aa14.78□□□□□ -0.04
TMCC3-204ENST00000552239 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
TMCC3-204ENST00000552239 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.05
TMCC3-204ENST00000552239 RC3H1Q5TC82 1133 aaKnown RBP14.77□□□□□ -0.05
TMCC3-204ENST00000552239 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
TMCC3-204ENST00000552239 UTRNP46939 3433 aa14.76□□□□□ -0.05
TMCC3-204ENST00000552239 CNTNAP4Q9C0A0 1308 aa14.76□□□□□ -0.05
TMCC3-204ENST00000552239 RPS6KA4O75676 772 aa14.76□□□□□ -0.05
TMCC3-204ENST00000552239 FCHSD2O94868 740 aa14.76□□□□□ -0.05
TMCC3-204ENST00000552239 CRKLP46109 303 aaKnown RBP14.76□□□□□ -0.05
TMCC3-204ENST00000552239 TEFQ10587 303 aa14.75□□□□□ -0.05
TMCC3-204ENST00000552239 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
TMCC3-204ENST00000552239 KCPQ6ZWJ8 1503 aa14.75□□□□□ -0.05
TMCC3-204ENST00000552239 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
TMCC3-204ENST00000552239 MCM10Q7L590 875 aa14.74□□□□□ -0.05
TMCC3-204ENST00000552239 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
TMCC3-204ENST00000552239 KCNQ3O43525 872 aa14.73□□□□□ -0.05
TMCC3-204ENST00000552239 RFC4P35249 363 aa14.73□□□□□ -0.05
TMCC3-204ENST00000552239 RALBP1Q15311 655 aa14.73□□□□□ -0.05
TMCC3-204ENST00000552239 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
TMCC3-204ENST00000552239 SIPA1L3O60292 1781 aaPredicted RBP14.73□□□□□ -0.05
TMCC3-204ENST00000552239 CYP19A1P11511 503 aaPredicted RBP14.72□□□□□ -0.05
TMCC3-204ENST00000552239 GPR162Q16538 588 aa14.72□□□□□ -0.05
TMCC3-204ENST00000552239 TTC5Q8N0Z6 440 aa14.72□□□□□ -0.05
TMCC3-204ENST00000552239 ZNF496Q96IT1 587 aaPredicted RBP14.72□□□□□ -0.05
TMCC3-204ENST00000552239 CEMIPQ8WUJ3 1361 aa14.72□□□□□ -0.05
TMCC3-204ENST00000552239 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
TMCC3-204ENST00000552239 UBR2Q8IWV8 1755 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 MMP10P09238 476 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 GYS1P13807 737 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 YY1P25490 414 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.05
TMCC3-204ENST00000552239 CCDC87Q9NVE4 849 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 C4AP0C0L4 1744 aa14.71□□□□□ -0.05
TMCC3-204ENST00000552239 CICQ96RK0 1608 aaPredicted RBP14.7□□□□□ -0.06
TMCC3-204ENST00000552239 BTBD11A6QL63 1104 aa14.7□□□□□ -0.06
TMCC3-204ENST00000552239 ADRA2BP18089 450 aa14.7□□□□□ -0.06
TMCC3-204ENST00000552239 PLEKHF1Q96S99 279 aa14.7□□□□□ -0.06
TMCC3-204ENST00000552239 WWC3Q9ULE0 1092 aa14.7□□□□□ -0.06
TMCC3-204ENST00000552239 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
TMCC3-204ENST00000552239 NLGN1Q8N2Q7 840 aa14.69□□□□□ -0.06
TMCC3-204ENST00000552239 CD2APQ9Y5K6 639 aa14.69□□□□□ -0.06
TMCC3-204ENST00000552239 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
TMCC3-204ENST00000552239 YBX3P16989 372 aaKnown RBP eCLIP14.68□□□□□ -0.06
TMCC3-204ENST00000552239 CANXP27824 592 aaKnown RBP14.68□□□□□ -0.06
TMCC3-204ENST00000552239 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
TMCC3-204ENST00000552239 FKBP8Q14318 412 aa14.68□□□□□ -0.06
TMCC3-204ENST00000552239 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
TMCC3-204ENST00000552239 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
TMCC3-204ENST00000552239 HEG1Q9ULI3 1381 aa14.68□□□□□ -0.06
TMCC3-204ENST00000552239 SOS1Q07889 1333 aaPredicted RBP14.67□□□□□ -0.06
TMCC3-204ENST00000552239 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms