RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 RBCK1Q9BYM8 510 aa6.5□□□□□ -1.37
LSM6P2-201ENST00000552208 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 FAM13AO94988 1023 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 SKOR1P84550 965 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 CC2D2BQ6DHV5 1058 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 TNS4Q8IZW8 715 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 SCG3Q8WXD2 468 aaKnown RBP6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 C8orf37Q96NL8 207 aa6.49□□□□□ -1.37
LSM6P2-201ENST00000552208 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 ITGBL1O95965 494 aaPredicted RBP6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 IGHA2P01877 340 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 INHAP05111 366 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 GDF10P55107 478 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 WNT7BP56706 349 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 FOXK2Q01167 660 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 TRIM32Q13049 653 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 EAPPQ56P03 285 aaPredicted RBP6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 TMC7Q7Z402 723 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 CDK15Q96Q40 435 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 SAP130Q9H0E3 1048 aa6.48□□□□□ -1.37
LSM6P2-201ENST00000552208 BACH1O14867 736 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 TREHO43280 583 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 P4HBP07237 508 aaKnown RBP6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 GRM5P41594 1212 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 RAB15P59190 212 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 DSC3Q14574 896 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 VASH1Q7L8A9 365 aaPredicted RBP6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 TSPAN10Q9H1Z9 355 aaPredicted RBP6.47□□□□□ -1.37
LSM6P2-201ENST00000552208 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 PPEF1O14829 653 aaPredicted RBP6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 LILRA1O75019 489 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 MPSTP25325 297 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 KCNC4Q03721 635 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 FMR1Q06787 632 aaKnown RBP eCLIP6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 PLA2G2CQ5R387 149 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 POTEAQ6S8J7 498 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 MPNDQ8N594 471 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 CITED4Q96RK1 184 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 ETNK1Q9HBU6 452 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 TMPRSS4Q9NRS4 437 aa6.46□□□□□ -1.38
LSM6P2-201ENST00000552208 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 FZD6O60353 706 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 GGCXP38435 758 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 MTFR1Q15390 333 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 ZNF787Q6DD87 383 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 C16orf46Q6P387 395 aa6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 C2orf49Q9BVC5 232 aaPredicted RBP6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 SCHIP1Q9P0W5 487 aaPredicted RBP6.45□□□□□ -1.38
LSM6P2-201ENST00000552208 RNF223E7ERA6 249 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 GNRH1P01148 92 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 COX20Q5RI15 118 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 ANKLE1Q8NAG6 615 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 BACH2Q9BYV9 841 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 CYLDQ9NQC7 956 aa6.44□□□□□ -1.38
LSM6P2-201ENST00000552208 ZBTB24O43167 697 aaPredicted RBP6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 SIAH2O43255 324 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 GFRA3O60609 400 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 EIF1AXP47813 144 aaKnown RBP6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 DHX9Q08211 1270 aaKnown RBP6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 ZNF784Q8NCA9 323 aaPredicted RBP6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 FAM129BQ96TA1 746 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 STIM2Q9P246 746 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 SERTAD1Q9UHV2 236 aa6.43□□□□□ -1.38
LSM6P2-201ENST00000552208 A6NJY4 79 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 NDUFB5O43674 189 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 PPP1R12BO60237 982 aaPredicted RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 ADD1P35611 737 aaKnown RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 RPIAP49247 311 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 SMTNP53814 917 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 XAGE2Q96GT9 111 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 MYO19Q96H55 970 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 ESF1Q9H501 851 aaKnown RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 QTRT2Q9H974 415 aaKnown RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 BRPF3Q9ULD4 1205 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 LRFN2Q9ULH4 789 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 IQSEC3Q9UPP2 1182 aaPredicted RBP6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 HRH3Q9Y5N1 445 aa6.42□□□□□ -1.38
LSM6P2-201ENST00000552208 FSHRP23945 695 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 FAM26DQ5JW98 314 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 PPP1R26Q5T8A7 1209 aaPredicted RBP6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 ALKBH2Q6NS38 261 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 SLC9A9Q8IVB4 645 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 CHMP7Q8WUX9 453 aaPredicted RBP6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 SREK1Q8WXA9 508 aaKnown RBP6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 TRIM52Q96A61 297 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 ALKBH8Q96BT7 664 aaKnown RBP6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 DMRTB1Q96MA1 342 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 DRC1Q96MC2 740 aa6.41□□□□□ -1.38
LSM6P2-201ENST00000552208 SCAMP3O14828 347 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms