RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 MEGF6O75095 1541 aa16.46■□□□□ 0.23
RBFOX1-214ENST00000552089 VEGFBP49765 207 aa16.45■□□□□ 0.22
RBFOX1-214ENST00000552089 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-214ENST00000552089 GNPATO15228 680 aa16.45■□□□□ 0.22
RBFOX1-214ENST00000552089 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-214ENST00000552089 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
RBFOX1-214ENST00000552089 RASSF7Q02833 373 aa16.44■□□□□ 0.22
RBFOX1-214ENST00000552089 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
RBFOX1-214ENST00000552089 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-214ENST00000552089 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
RBFOX1-214ENST00000552089 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
RBFOX1-214ENST00000552089 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
RBFOX1-214ENST00000552089 KDM6AO15550 1401 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-214ENST00000552089 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
RBFOX1-214ENST00000552089 CHADLQ6NUI6 762 aa16.42■□□□□ 0.22
RBFOX1-214ENST00000552089 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-214ENST00000552089 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
RBFOX1-214ENST00000552089 SBF1O95248 1867 aa16.4■□□□□ 0.22
RBFOX1-214ENST00000552089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
RBFOX1-214ENST00000552089 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
RBFOX1-214ENST00000552089 POTECB2RU33 542 aa16.39■□□□□ 0.21
RBFOX1-214ENST00000552089 ANP32CO43423 234 aa16.39■□□□□ 0.21
RBFOX1-214ENST00000552089 TMF1P82094 1093 aa16.39■□□□□ 0.21
RBFOX1-214ENST00000552089 LMNB1P20700 586 aa16.38■□□□□ 0.21
RBFOX1-214ENST00000552089 NME9Q86XW9 330 aa16.38■□□□□ 0.21
RBFOX1-214ENST00000552089 IP6K1Q92551 441 aa16.38■□□□□ 0.21
RBFOX1-214ENST00000552089 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
RBFOX1-214ENST00000552089 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-214ENST00000552089 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
RBFOX1-214ENST00000552089 TIAM2Q8IVF5 1701 aa16.37■□□□□ 0.21
RBFOX1-214ENST00000552089 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 CHRNA5P30532 468 aa16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 SIK1P57059 783 aa16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
RBFOX1-214ENST00000552089 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
RBFOX1-214ENST00000552089 POTEJP0CG39 1038 aa16.35■□□□□ 0.21
RBFOX1-214ENST00000552089 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
RBFOX1-214ENST00000552089 TMEM88BA6NKF7 163 aa16.34■□□□□ 0.21
RBFOX1-214ENST00000552089 ITPK1Q13572 414 aa16.34■□□□□ 0.21
RBFOX1-214ENST00000552089 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.21
RBFOX1-214ENST00000552089 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.21
RBFOX1-214ENST00000552089 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.21
RBFOX1-214ENST00000552089 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
RBFOX1-214ENST00000552089 PRPF38BQ5VTL8 546 aaKnown RBP16.33■□□□□ 0.2
RBFOX1-214ENST00000552089 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
RBFOX1-214ENST00000552089 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
RBFOX1-214ENST00000552089 GYS1P13807 737 aa16.32■□□□□ 0.2
RBFOX1-214ENST00000552089 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
RBFOX1-214ENST00000552089 PIGBQ92521 554 aa16.31■□□□□ 0.2
RBFOX1-214ENST00000552089 MCOLN1Q9GZU1 580 aa16.31■□□□□ 0.2
RBFOX1-214ENST00000552089 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
RBFOX1-214ENST00000552089 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
RBFOX1-214ENST00000552089 SBNO2Q9Y2G9 1366 aa16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 WDR33Q9C0J8 1336 aaKnown RBP16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
RBFOX1-214ENST00000552089 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 WASHC2AQ641Q2 1341 aa16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 HOXC9P31274 260 aa16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 DEFB115Q30KQ5 88 aa16.28■□□□□ 0.2
RBFOX1-214ENST00000552089 ITGB4P16144 1822 aa16.27■□□□□ 0.2
RBFOX1-214ENST00000552089 ADRA2BP18089 450 aa16.27■□□□□ 0.19
RBFOX1-214ENST00000552089 RFC4P35249 363 aa16.27■□□□□ 0.19
RBFOX1-214ENST00000552089 LDHDQ86WU2 507 aa16.27■□□□□ 0.19
RBFOX1-214ENST00000552089 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.19
RBFOX1-214ENST00000552089 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 NFKBIEO00221 500 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 CYP27B1O15528 508 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 NBPF6Q5VWK0 638 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 NBPF4Q96M43 638 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
RBFOX1-214ENST00000552089 AMPHP49418 695 aa16.25■□□□□ 0.19
RBFOX1-214ENST00000552089 DDR1Q08345 913 aa16.25■□□□□ 0.19
RBFOX1-214ENST00000552089 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
RBFOX1-214ENST00000552089 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
RBFOX1-214ENST00000552089 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
RBFOX1-214ENST00000552089 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
RBFOX1-214ENST00000552089 TESK2Q96S53 571 aa16.22■□□□□ 0.19
RBFOX1-214ENST00000552089 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 SOX10P56693 466 aa16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 DGKZQ13574 1117 aa16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
RBFOX1-214ENST00000552089 KDRP35968 1356 aa16.2■□□□□ 0.18
RBFOX1-214ENST00000552089 LTBP1Q14766 1721 aa16.2■□□□□ 0.18
RBFOX1-214ENST00000552089 FKBP8Q14318 412 aa16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms