RNA–Protein interactions for RNA: ENST00000551900.5

CALCOCO1-219, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-219ENST00000551900 ITGB4P16144 1822 aa13.08□□□□□ -0.32
CALCOCO1-219ENST00000551900 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
CALCOCO1-219ENST00000551900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 HMOX1P09601 288 aa13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 ADRA2BP18089 450 aa13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
CALCOCO1-219ENST00000551900 GNPATO15228 680 aa13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 GPR162Q16538 588 aa13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
CALCOCO1-219ENST00000551900 PHF14O94880 888 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 ITPK1Q13572 414 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 C5P01031 1676 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
CALCOCO1-219ENST00000551900 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
CALCOCO1-219ENST00000551900 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
CALCOCO1-219ENST00000551900 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
CALCOCO1-219ENST00000551900 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
CALCOCO1-219ENST00000551900 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
CALCOCO1-219ENST00000551900 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 NEFMP07197 916 aa13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 RFC4P35249 363 aa13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
CALCOCO1-219ENST00000551900 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
CALCOCO1-219ENST00000551900 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 FCHSD2O94868 740 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 PPP2R1AP30153 589 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 TEFQ10587 303 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
CALCOCO1-219ENST00000551900 LGR6Q9HBX8 967 aa13□□□□□ -0.33
CALCOCO1-219ENST00000551900 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO1-219ENST00000551900 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
CALCOCO1-219ENST00000551900 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
CALCOCO1-219ENST00000551900 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
CALCOCO1-219ENST00000551900 STARD3NLO95772 234 aa12.97□□□□□ -0.33
CALCOCO1-219ENST00000551900 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
CALCOCO1-219ENST00000551900 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 ZPR1O75312 459 aa12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 MMP10P09238 476 aa12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 PRKAR2BP31323 418 aa12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
CALCOCO1-219ENST00000551900 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 TGFB2P61812 414 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 RALBP1Q15311 655 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO1-219ENST00000551900 A0A087WZG4 1122 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 GYS1P13807 737 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
CALCOCO1-219ENST00000551900 MRC1P22897 1456 aa12.93□□□□□ -0.34
CALCOCO1-219ENST00000551900 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO1-219ENST00000551900 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-219ENST00000551900 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
CALCOCO1-219ENST00000551900 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
CALCOCO1-219ENST00000551900 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
CALCOCO1-219ENST00000551900 PHACTR3Q96KR7 559 aa12.92□□□□□ -0.34
CALCOCO1-219ENST00000551900 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-219ENST00000551900 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
CALCOCO1-219ENST00000551900 CHD4Q14839 1912 aa12.9□□□□□ -0.34
CALCOCO1-219ENST00000551900 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-219ENST00000551900 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-219ENST00000551900 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
CALCOCO1-219ENST00000551900 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
CALCOCO1-219ENST00000551900 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-219ENST00000551900 UTRNP46939 3433 aa12.88□□□□□ -0.35
CALCOCO1-219ENST00000551900 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
CALCOCO1-219ENST00000551900 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-219ENST00000551900 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-219ENST00000551900 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms