RNA–Protein interactions for RNA: ENST00000551747.1

CHERP-205, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-205ENST00000551747 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
CHERP-205ENST00000551747 PHF14O94880 888 aa16.82■□□□□ 0.28
CHERP-205ENST00000551747 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
CHERP-205ENST00000551747 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
CHERP-205ENST00000551747 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
CHERP-205ENST00000551747 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
CHERP-205ENST00000551747 PANK3Q9H999 370 aa16.81■□□□□ 0.28
CHERP-205ENST00000551747 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
CHERP-205ENST00000551747 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
CHERP-205ENST00000551747 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
CHERP-205ENST00000551747 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
CHERP-205ENST00000551747 GNPATO15228 680 aa16.79■□□□□ 0.28
CHERP-205ENST00000551747 DCAF5Q96JK2 942 aa16.79■□□□□ 0.28
CHERP-205ENST00000551747 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
CHERP-205ENST00000551747 KIF13BQ9NQT8 1826 aa16.79■□□□□ 0.28
CHERP-205ENST00000551747 ADCY9O60503 1353 aa16.78■□□□□ 0.28
CHERP-205ENST00000551747 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
CHERP-205ENST00000551747 KIAA1551Q9HCM1 1747 aa16.78■□□□□ 0.28
CHERP-205ENST00000551747 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.28
CHERP-205ENST00000551747 ATP10DQ9P241 1426 aa16.77■□□□□ 0.27
CHERP-205ENST00000551747 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
CHERP-205ENST00000551747 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
CHERP-205ENST00000551747 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
CHERP-205ENST00000551747 CICQ96RK0 1608 aaPredicted RBP16.76■□□□□ 0.27
CHERP-205ENST00000551747 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
CHERP-205ENST00000551747 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
CHERP-205ENST00000551747 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
CHERP-205ENST00000551747 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
CHERP-205ENST00000551747 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
CHERP-205ENST00000551747 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
CHERP-205ENST00000551747 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
CHERP-205ENST00000551747 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
CHERP-205ENST00000551747 MMP10P09238 476 aa16.73■□□□□ 0.27
CHERP-205ENST00000551747 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
CHERP-205ENST00000551747 MORC1Q86VD1 984 aa16.73■□□□□ 0.27
CHERP-205ENST00000551747 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
CHERP-205ENST00000551747 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
CHERP-205ENST00000551747 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
CHERP-205ENST00000551747 TJP1Q07157 1748 aa16.72■□□□□ 0.27
CHERP-205ENST00000551747 C10orf71Q711Q0 1435 aa16.71■□□□□ 0.27
CHERP-205ENST00000551747 RPS6KA4O75676 772 aa16.71■□□□□ 0.27
CHERP-205ENST00000551747 IL13P35225 146 aa16.71■□□□□ 0.27
CHERP-205ENST00000551747 CABP4P57796 275 aa16.71■□□□□ 0.27
CHERP-205ENST00000551747 ARHGEF1Q92888 912 aaKnown RBP16.71■□□□□ 0.27
CHERP-205ENST00000551747 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
CHERP-205ENST00000551747 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
CHERP-205ENST00000551747 GYS1P13807 737 aa16.7■□□□□ 0.26
CHERP-205ENST00000551747 MTHFSP49914 203 aa16.7■□□□□ 0.26
CHERP-205ENST00000551747 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
CHERP-205ENST00000551747 SULT6B1Q6IMI4 303 aa16.7■□□□□ 0.26
CHERP-205ENST00000551747 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
CHERP-205ENST00000551747 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
CHERP-205ENST00000551747 TGFB2P61812 414 aa16.69■□□□□ 0.26
CHERP-205ENST00000551747 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
CHERP-205ENST00000551747 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
CHERP-205ENST00000551747 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
CHERP-205ENST00000551747 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
CHERP-205ENST00000551747 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
CHERP-205ENST00000551747 RFC4P35249 363 aa16.67■□□□□ 0.26
CHERP-205ENST00000551747 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
CHERP-205ENST00000551747 CCER1Q8TC90 406 aaPredicted RBP16.67■□□□□ 0.26
CHERP-205ENST00000551747 MRC1P22897 1456 aa16.67■□□□□ 0.26
CHERP-205ENST00000551747 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
CHERP-205ENST00000551747 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
CHERP-205ENST00000551747 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
CHERP-205ENST00000551747 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
CHERP-205ENST00000551747 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
CHERP-205ENST00000551747 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
CHERP-205ENST00000551747 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
CHERP-205ENST00000551747 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
CHERP-205ENST00000551747 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
CHERP-205ENST00000551747 DPEP1P16444 411 aa16.63■□□□□ 0.25
CHERP-205ENST00000551747 KCNA3P22001 575 aa16.63■□□□□ 0.25
CHERP-205ENST00000551747 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
CHERP-205ENST00000551747 ZNF526Q8TF50 670 aaPredicted RBP16.63■□□□□ 0.25
CHERP-205ENST00000551747 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
CHERP-205ENST00000551747 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
CHERP-205ENST00000551747 KIF3CO14782 793 aa16.62■□□□□ 0.25
CHERP-205ENST00000551747 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
CHERP-205ENST00000551747 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
CHERP-205ENST00000551747 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
CHERP-205ENST00000551747 KCPQ6ZWJ8 1503 aa16.61■□□□□ 0.25
CHERP-205ENST00000551747 FKBP8Q14318 412 aa16.61■□□□□ 0.25
CHERP-205ENST00000551747 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
CHERP-205ENST00000551747 HSPA6P17066 643 aa16.6■□□□□ 0.25
CHERP-205ENST00000551747 DDR1Q08345 913 aa16.6■□□□□ 0.25
CHERP-205ENST00000551747 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
CHERP-205ENST00000551747 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
CHERP-205ENST00000551747 DNAJC10Q8IXB1 793 aa16.59■□□□□ 0.25
CHERP-205ENST00000551747 HMOX1P09601 288 aa16.58■□□□□ 0.24
CHERP-205ENST00000551747 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
CHERP-205ENST00000551747 TM4SF1P30408 202 aa16.58■□□□□ 0.24
CHERP-205ENST00000551747 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
CHERP-205ENST00000551747 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.24
CHERP-205ENST00000551747 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
CHERP-205ENST00000551747 NRXN2Q9P2S2 1712 aa16.57■□□□□ 0.24
CHERP-205ENST00000551747 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
CHERP-205ENST00000551747 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
CHERP-205ENST00000551747 FCHSD2O94868 740 aa16.57■□□□□ 0.24
CHERP-205ENST00000551747 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms