RNA–Protein interactions for RNA: ENST00000551506.1

SLC38A1-209, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 586 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-209ENST00000551506 SMIM5Q71RC9 77 aa24.35■■□□□ 1.49
SLC38A1-209ENST00000551506 SYT17Q9BSW7 474 aa24.35■■□□□ 1.49
SLC38A1-209ENST00000551506 ZNF831Q5JPB2 1677 aa24.34■■□□□ 1.49
SLC38A1-209ENST00000551506 CABP4P57796 275 aa24.33■■□□□ 1.49
SLC38A1-209ENST00000551506 ADAMTS7Q9UKP4 1686 aa24.32■■□□□ 1.48
SLC38A1-209ENST00000551506 ATP6V1AP38606 617 aa24.32■■□□□ 1.48
SLC38A1-209ENST00000551506 MTHFSDQ2M296 383 aaKnown RBP24.32■■□□□ 1.48
SLC38A1-209ENST00000551506 AKAP4Q5JQC9 854 aa24.32■■□□□ 1.48
SLC38A1-209ENST00000551506 MAP3K5Q99683 1374 aa24.31■■□□□ 1.48
SLC38A1-209ENST00000551506 PPP2R1AP30153 589 aa24.31■■□□□ 1.48
SLC38A1-209ENST00000551506 NFATC2IPQ8NCF5 419 aa24.31■■□□□ 1.48
SLC38A1-209ENST00000551506 LGR6Q9HBX8 967 aa24.31■■□□□ 1.48
SLC38A1-209ENST00000551506 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
SLC38A1-209ENST00000551506 HMGB2P26583 209 aaKnown RBP24.3■■□□□ 1.48
SLC38A1-209ENST00000551506 AK7Q96M32 723 aa24.3■■□□□ 1.48
SLC38A1-209ENST00000551506 MSH5O43196 834 aa24.29■■□□□ 1.48
SLC38A1-209ENST00000551506 MRC1P22897 1456 aa24.29■■□□□ 1.48
SLC38A1-209ENST00000551506 COL5A3P25940 1745 aaPredicted RBP24.29■■□□□ 1.48
SLC38A1-209ENST00000551506 U2SURPO15042 1029 aaKnown RBP24.28■■□□□ 1.48
SLC38A1-209ENST00000551506 MSL1Q68DK7 614 aa24.28■■□□□ 1.48
SLC38A1-209ENST00000551506 FLAD1Q8NFF5 587 aa24.28■■□□□ 1.48
SLC38A1-209ENST00000551506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.27■■□□□ 1.48
SLC38A1-209ENST00000551506 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
SLC38A1-209ENST00000551506 POLD1P28340 1107 aa24.27■■□□□ 1.48
SLC38A1-209ENST00000551506 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
SLC38A1-209ENST00000551506 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
SLC38A1-209ENST00000551506 PHF14O94880 888 aa24.25■■□□□ 1.47
SLC38A1-209ENST00000551506 SSFA2P28290 1259 aa24.25■■□□□ 1.47
SLC38A1-209ENST00000551506 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
SLC38A1-209ENST00000551506 GNPATO15228 680 aa24.24■■□□□ 1.47
SLC38A1-209ENST00000551506 CICQ96RK0 1608 aaPredicted RBP24.24■■□□□ 1.47
SLC38A1-209ENST00000551506 TJP1Q07157 1748 aa24.24■■□□□ 1.47
SLC38A1-209ENST00000551506 PTCD1O75127 700 aaKnown RBP24.22■■□□□ 1.47
SLC38A1-209ENST00000551506 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
SLC38A1-209ENST00000551506 RSPH6AQ9H0K4 717 aa24.22■■□□□ 1.47
SLC38A1-209ENST00000551506 RC3H1Q5TC82 1133 aaKnown RBP24.21■■□□□ 1.47
SLC38A1-209ENST00000551506 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
SLC38A1-209ENST00000551506 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
SLC38A1-209ENST00000551506 NLGN2Q8NFZ4 835 aa24.2■■□□□ 1.46
SLC38A1-209ENST00000551506 KCPQ6ZWJ8 1503 aa24.19■■□□□ 1.46
SLC38A1-209ENST00000551506 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
SLC38A1-209ENST00000551506 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
SLC38A1-209ENST00000551506 KLHL34Q8N239 644 aa24.18■■□□□ 1.46
SLC38A1-209ENST00000551506 IL17REQ8NFR9 667 aa24.18■■□□□ 1.46
SLC38A1-209ENST00000551506 UTRNP46939 3433 aa24.17■■□□□ 1.46
SLC38A1-209ENST00000551506 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
SLC38A1-209ENST00000551506 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
SLC38A1-209ENST00000551506 RTCBQ9Y3I0 505 aaKnown RBP24.16■■□□□ 1.46
SLC38A1-209ENST00000551506 SIPA1L3O60292 1781 aaPredicted RBP24.16■■□□□ 1.46
SLC38A1-209ENST00000551506 DCAF8L1A6NGE4 600 aa24.15■■□□□ 1.46
SLC38A1-209ENST00000551506 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
SLC38A1-209ENST00000551506 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
SLC38A1-209ENST00000551506 UBR2Q8IWV8 1755 aa24.15■■□□□ 1.46
SLC38A1-209ENST00000551506 C4AP0C0L4 1744 aa24.15■■□□□ 1.46
SLC38A1-209ENST00000551506 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.45
SLC38A1-209ENST00000551506 U2AF1L5P0DN76 240 aaPredicted RBP24.14■■□□□ 1.45
SLC38A1-209ENST00000551506 U2AF1Q01081 240 aaKnown RBP eCLIP24.14■■□□□ 1.45
SLC38A1-209ENST00000551506 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
SLC38A1-209ENST00000551506 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
SLC38A1-209ENST00000551506 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
SLC38A1-209ENST00000551506 DNAJC10Q8IXB1 793 aa24.13■■□□□ 1.45
SLC38A1-209ENST00000551506 CEMIPQ8WUJ3 1361 aa24.13■■□□□ 1.45
SLC38A1-209ENST00000551506 ADRA2BP18089 450 aa24.12■■□□□ 1.45
SLC38A1-209ENST00000551506 FCHSD2O94868 740 aa24.11■■□□□ 1.45
SLC38A1-209ENST00000551506 YY1P25490 414 aa24.1■■□□□ 1.45
SLC38A1-209ENST00000551506 CD2APQ9Y5K6 639 aa24.1■■□□□ 1.45
SLC38A1-209ENST00000551506 CYP19A1P11511 503 aaPredicted RBP24.09■■□□□ 1.45
SLC38A1-209ENST00000551506 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
SLC38A1-209ENST00000551506 GOLGB1Q14789 3259 aaKnown RBP24.08■■□□□ 1.45
SLC38A1-209ENST00000551506 GYS1P13807 737 aa24.08■■□□□ 1.45
SLC38A1-209ENST00000551506 MMP10P09238 476 aa24.06■■□□□ 1.44
SLC38A1-209ENST00000551506 TEFQ10587 303 aa24.06■■□□□ 1.44
SLC38A1-209ENST00000551506 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
SLC38A1-209ENST00000551506 CCDC87Q9NVE4 849 aa24.06■■□□□ 1.44
SLC38A1-209ENST00000551506 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.443e-7■□□□□ 9.4
SLC38A1-209ENST00000551506 RFC4P35249 363 aa24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 GPR162Q16538 588 aa24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 SRP68Q9UHB9 627 aaKnown RBP24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 CHD4Q14839 1912 aa24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
SLC38A1-209ENST00000551506 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
SLC38A1-209ENST00000551506 NLGN1Q8N2Q7 840 aa24.04■■□□□ 1.44
SLC38A1-209ENST00000551506 KCNQ3O43525 872 aa24.03■■□□□ 1.44
SLC38A1-209ENST00000551506 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
SLC38A1-209ENST00000551506 USP42Q9H9J4 1324 aaKnown RBP24.03■■□□□ 1.44
SLC38A1-209ENST00000551506 KIF13BQ9NQT8 1826 aa24.03■■□□□ 1.44
SLC38A1-209ENST00000551506 KIAA1551Q9HCM1 1747 aa24.02■■□□□ 1.44
SLC38A1-209ENST00000551506 RALBP1Q15311 655 aa24.02■■□□□ 1.44
SLC38A1-209ENST00000551506 PLEKHF1Q96S99 279 aa24.02■■□□□ 1.44
SLC38A1-209ENST00000551506 HEG1Q9ULI3 1381 aa24.02■■□□□ 1.44
SLC38A1-209ENST00000551506 MCM10Q7L590 875 aa24.01■■□□□ 1.43
SLC38A1-209ENST00000551506 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
SLC38A1-209ENST00000551506 TTC5Q8N0Z6 440 aa24.01■■□□□ 1.43
SLC38A1-209ENST00000551506 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
SLC38A1-209ENST00000551506 DCTN1Q14203 1278 aa24■■□□□ 1.43
SLC38A1-209ENST00000551506 FKBP8Q14318 412 aa24■■□□□ 1.43
SLC38A1-209ENST00000551506 C10orf71Q711Q0 1435 aa23.99■■□□□ 1.43
SLC38A1-209ENST00000551506 HTATSF1O43719 755 aaKnown RBP23.98■■□□□ 1.43
SLC38A1-209ENST00000551506 BTBD11A6QL63 1104 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms