RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-210ENST00000551352 KLHL34Q8N239 644 aa9.9□□□□□ -0.82
SMARCD1-210ENST00000551352 PIGBQ92521 554 aa9.9□□□□□ -0.82
SMARCD1-210ENST00000551352 EYA1Q99502 592 aa9.9□□□□□ -0.82
SMARCD1-210ENST00000551352 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
SMARCD1-210ENST00000551352 KDRP35968 1356 aa9.89□□□□□ -0.83
SMARCD1-210ENST00000551352 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
SMARCD1-210ENST00000551352 LINC00116Q8NCU8 138 aa9.89□□□□□ -0.83
SMARCD1-210ENST00000551352 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
SMARCD1-210ENST00000551352 KDM6AO15550 1401 aaPredicted RBP9.89□□□□□ -0.83
SMARCD1-210ENST00000551352 CEP350Q5VT06 3117 aa9.88□□□□□ -0.83
SMARCD1-210ENST00000551352 DCAF8L1A6NGE4 600 aa9.88□□□□□ -0.83
SMARCD1-210ENST00000551352 PPP2R1AP30153 589 aa9.88□□□□□ -0.83
SMARCD1-210ENST00000551352 ITPK1Q13572 414 aa9.88□□□□□ -0.83
SMARCD1-210ENST00000551352 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
SMARCD1-210ENST00000551352 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
SMARCD1-210ENST00000551352 POLD1P28340 1107 aa9.87□□□□□ -0.83
SMARCD1-210ENST00000551352 EIF4A2Q14240 407 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-210ENST00000551352 GPR162Q16538 588 aa9.87□□□□□ -0.83
SMARCD1-210ENST00000551352 ARFGEF1Q9Y6D6 1849 aa9.86□□□□□ -0.83
SMARCD1-210ENST00000551352 PHKG2P15735 406 aa9.86□□□□□ -0.83
SMARCD1-210ENST00000551352 ASAP1Q9ULH1 1129 aa9.86□□□□□ -0.83
SMARCD1-210ENST00000551352 AFDNP55196 1824 aaKnown RBP9.86□□□□□ -0.83
SMARCD1-210ENST00000551352 ADCY9O60503 1353 aa9.86□□□□□ -0.83
SMARCD1-210ENST00000551352 IGSF1Q8N6C5 1336 aa9.85□□□□□ -0.83
SMARCD1-210ENST00000551352 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-210ENST00000551352 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-210ENST00000551352 UBR2Q8IWV8 1755 aa9.85□□□□□ -0.83
SMARCD1-210ENST00000551352 SIPA1L3O60292 1781 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 MSH5O43196 834 aa9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 TNNT2P45379 298 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 C1QTNF8P60827 252 aa9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 ATG3Q9NT62 314 aa9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 SBF1O95248 1867 aa9.84□□□□□ -0.83
SMARCD1-210ENST00000551352 ATP10DQ9P241 1426 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 PHF14O94880 888 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 SIK1P57059 783 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 AEBP1Q8IUX7 1158 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 PXDNLA1KZ92 1463 aa9.83□□□□□ -0.84
SMARCD1-210ENST00000551352 MORC1Q86VD1 984 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 SPG7Q9UQ90 795 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 PLEKHG2Q9H7P9 1386 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 DLEC1Q9Y238 1755 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
SMARCD1-210ENST00000551352 CCDC88AQ3V6T2 1871 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 AK7Q96M32 723 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 CD2APQ9Y5K6 639 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 C10orf71Q711Q0 1435 aa9.81□□□□□ -0.84
SMARCD1-210ENST00000551352 MRC1P22897 1456 aa9.8□□□□□ -0.84
SMARCD1-210ENST00000551352 SSFA2P28290 1259 aa9.8□□□□□ -0.84
SMARCD1-210ENST00000551352 FLAD1Q8NFF5 587 aa9.8□□□□□ -0.84
SMARCD1-210ENST00000551352 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
SMARCD1-210ENST00000551352 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 ANKRD31Q8N7Z5 1873 aa9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 GNPATO15228 680 aa9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 WDR43Q15061 677 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCD1-210ENST00000551352 POTEDQ86YR6 584 aa9.78□□□□□ -0.84
SMARCD1-210ENST00000551352 CACNA1SQ13698 1873 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 GRIN3BO60391 1043 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 IL13P35225 146 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 CNTNAP4Q9C0A0 1308 aa9.77□□□□□ -0.85
SMARCD1-210ENST00000551352 COL11A2P13942 1736 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-210ENST00000551352 MMP10P09238 476 aa9.76□□□□□ -0.85
SMARCD1-210ENST00000551352 GYS1P13807 737 aa9.76□□□□□ -0.85
SMARCD1-210ENST00000551352 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-210ENST00000551352 SCN7AQ01118 1682 aa9.76□□□□□ -0.85
SMARCD1-210ENST00000551352 MTHFSP49914 203 aa9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 DCAF5Q96JK2 942 aa9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 SRP68Q9UHB9 627 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
SMARCD1-210ENST00000551352 TIAM2Q8IVF5 1701 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 WDR90Q96KV7 1748 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 RPS6KA4O75676 772 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 KCNA3P22001 575 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 DDR1Q08345 913 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 PLEKHO1Q53GL0 409 aaPredicted RBP9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 NUDCQ9Y266 331 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 DLG5Q8TDM6 1919 aa9.74□□□□□ -0.85
SMARCD1-210ENST00000551352 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 KIF3CO14782 793 aa9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 PTCD1O75127 700 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms