RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
GPN3-208ENST00000550974 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
GPN3-208ENST00000550974 POTECB2RU33 542 aa16.36■□□□□ 0.21
GPN3-208ENST00000550974 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
GPN3-208ENST00000550974 LOC102724428A0A0B4J2F2 783 aa16.34■□□□□ 0.21
GPN3-208ENST00000550974 SIK1P57059 783 aa16.34■□□□□ 0.21
GPN3-208ENST00000550974 TRAPPC3LQ5T215 181 aa16.34■□□□□ 0.21
GPN3-208ENST00000550974 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
GPN3-208ENST00000550974 SBF1O95248 1867 aa16.33■□□□□ 0.21
GPN3-208ENST00000550974 CHRNA5P30532 468 aa16.33■□□□□ 0.2
GPN3-208ENST00000550974 C4AP0C0L4 1744 aa16.32■□□□□ 0.2
GPN3-208ENST00000550974 LMNB1P20700 586 aa16.32■□□□□ 0.2
GPN3-208ENST00000550974 ITPK1Q13572 414 aa16.31■□□□□ 0.2
GPN3-208ENST00000550974 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
GPN3-208ENST00000550974 PIGBQ92521 554 aa16.31■□□□□ 0.2
GPN3-208ENST00000550974 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
GPN3-208ENST00000550974 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
GPN3-208ENST00000550974 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
GPN3-208ENST00000550974 ATP6V1AP38606 617 aa16.3■□□□□ 0.2
GPN3-208ENST00000550974 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
GPN3-208ENST00000550974 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
GPN3-208ENST00000550974 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
GPN3-208ENST00000550974 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
GPN3-208ENST00000550974 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
GPN3-208ENST00000550974 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
GPN3-208ENST00000550974 GYS1P13807 737 aa16.29■□□□□ 0.2
GPN3-208ENST00000550974 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
GPN3-208ENST00000550974 HOXC9P31274 260 aa16.28■□□□□ 0.2
GPN3-208ENST00000550974 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
GPN3-208ENST00000550974 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
GPN3-208ENST00000550974 TMEM88BA6NKF7 163 aa16.27■□□□□ 0.2
GPN3-208ENST00000550974 RFC4P35249 363 aa16.27■□□□□ 0.2
GPN3-208ENST00000550974 AMPHP49418 695 aa16.27■□□□□ 0.2
GPN3-208ENST00000550974 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
GPN3-208ENST00000550974 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
GPN3-208ENST00000550974 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
GPN3-208ENST00000550974 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
GPN3-208ENST00000550974 MON2Q7Z3U7 1717 aa16.26■□□□□ 0.19
GPN3-208ENST00000550974 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
GPN3-208ENST00000550974 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
GPN3-208ENST00000550974 CYP27B1O15528 508 aa16.25■□□□□ 0.19
GPN3-208ENST00000550974 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
GPN3-208ENST00000550974 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
GPN3-208ENST00000550974 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
GPN3-208ENST00000550974 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
GPN3-208ENST00000550974 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
GPN3-208ENST00000550974 FBLN1P23142 703 aa16.23■□□□□ 0.19
GPN3-208ENST00000550974 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
GPN3-208ENST00000550974 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
GPN3-208ENST00000550974 ITGB4P16144 1822 aa16.22■□□□□ 0.19
GPN3-208ENST00000550974 ADRA2BP18089 450 aa16.22■□□□□ 0.19
GPN3-208ENST00000550974 BEGAINQ9BUH8 593 aa16.22■□□□□ 0.19
GPN3-208ENST00000550974 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
GPN3-208ENST00000550974 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
GPN3-208ENST00000550974 RASSF10A6NK89 507 aa16.2■□□□□ 0.18
GPN3-208ENST00000550974 DDR1Q08345 913 aa16.2■□□□□ 0.18
GPN3-208ENST00000550974 PRPF38BQ5VTL8 546 aaKnown RBP16.2■□□□□ 0.18
GPN3-208ENST00000550974 HDGFL2Q7Z4V5 671 aaPredicted RBP16.2■□□□□ 0.18
GPN3-208ENST00000550974 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
GPN3-208ENST00000550974 TSKSQ9UJT2 592 aa16.2■□□□□ 0.18
GPN3-208ENST00000550974 NFKBIEO00221 500 aa16.19■□□□□ 0.18
GPN3-208ENST00000550974 DDNO94850 711 aaPredicted RBP16.19■□□□□ 0.18
GPN3-208ENST00000550974 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
GPN3-208ENST00000550974 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
GPN3-208ENST00000550974 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
GPN3-208ENST00000550974 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
GPN3-208ENST00000550974 FKBP8Q14318 412 aa16.18■□□□□ 0.18
GPN3-208ENST00000550974 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
GPN3-208ENST00000550974 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
GPN3-208ENST00000550974 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
GPN3-208ENST00000550974 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
GPN3-208ENST00000550974 TNRC18O15417 2968 aaPredicted RBP16.16■□□□□ 0.18
GPN3-208ENST00000550974 GRM1Q13255 1194 aa16.15■□□□□ 0.18
GPN3-208ENST00000550974 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
GPN3-208ENST00000550974 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
GPN3-208ENST00000550974 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
GPN3-208ENST00000550974 TTLL6Q8N841 843 aa16.15■□□□□ 0.18
GPN3-208ENST00000550974 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
GPN3-208ENST00000550974 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
GPN3-208ENST00000550974 SMG6Q86US8 1419 aaKnown RBP16.14■□□□□ 0.17
GPN3-208ENST00000550974 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
GPN3-208ENST00000550974 DGKZQ13574 1117 aa16.14■□□□□ 0.17
GPN3-208ENST00000550974 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
GPN3-208ENST00000550974 COG3Q96JB2 828 aa16.14■□□□□ 0.17
GPN3-208ENST00000550974 SLC12A5Q9H2X9 1139 aa16.14■□□□□ 0.17
GPN3-208ENST00000550974 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
GPN3-208ENST00000550974 IQCA1LA6NCM1 817 aa16.13■□□□□ 0.17
GPN3-208ENST00000550974 SOX10P56693 466 aa16.13■□□□□ 0.17
GPN3-208ENST00000550974 RRS1Q15050 365 aaKnown RBP16.13■□□□□ 0.17
GPN3-208ENST00000550974 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
GPN3-208ENST00000550974 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
GPN3-208ENST00000550974 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
GPN3-208ENST00000550974 CNTNAP4Q9C0A0 1308 aa16.13■□□□□ 0.17
GPN3-208ENST00000550974 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
GPN3-208ENST00000550974 CAPNS2Q96L46 248 aa16.11■□□□□ 0.17
GPN3-208ENST00000550974 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
GPN3-208ENST00000550974 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
GPN3-208ENST00000550974 KDRP35968 1356 aa16.11■□□□□ 0.17
GPN3-208ENST00000550974 TM4SF1P30408 202 aa16.1■□□□□ 0.17
GPN3-208ENST00000550974 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms