RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.1
CPNE8-207ENST00000550863 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 SIK1P57059 783 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 ZNF530Q6P9A1 599 aaPredicted RBP15.7■□□□□ 0.1
CPNE8-207ENST00000550863 AK7Q96M32 723 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 SLC4A9Q96Q91 983 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.1
CPNE8-207ENST00000550863 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
CPNE8-207ENST00000550863 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
CPNE8-207ENST00000550863 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
CPNE8-207ENST00000550863 IL13P35225 146 aa15.68■□□□□ 0.1
CPNE8-207ENST00000550863 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
CPNE8-207ENST00000550863 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
CPNE8-207ENST00000550863 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
CPNE8-207ENST00000550863 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
CPNE8-207ENST00000550863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
CPNE8-207ENST00000550863 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
CPNE8-207ENST00000550863 UBR2Q8IWV8 1755 aa15.67■□□□□ 0.1
CPNE8-207ENST00000550863 GNPATO15228 680 aa15.66■□□□□ 0.1
CPNE8-207ENST00000550863 YBX3P16989 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
CPNE8-207ENST00000550863 ATP6V1AP38606 617 aa15.66■□□□□ 0.1
CPNE8-207ENST00000550863 MRC1P22897 1456 aa15.65■□□□□ 0.1
CPNE8-207ENST00000550863 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
CPNE8-207ENST00000550863 PLEKHG2Q9H7P9 1386 aa15.65■□□□□ 0.1
CPNE8-207ENST00000550863 PER1O15534 1290 aaPredicted RBP15.65■□□□□ 0.1
CPNE8-207ENST00000550863 HMOX1P09601 288 aa15.65■□□□□ 0.1
CPNE8-207ENST00000550863 GPR162Q16538 588 aa15.65■□□□□ 0.1
CPNE8-207ENST00000550863 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
CPNE8-207ENST00000550863 MTHFSP49914 203 aa15.64■□□□□ 0.09
CPNE8-207ENST00000550863 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
CPNE8-207ENST00000550863 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
CPNE8-207ENST00000550863 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
CPNE8-207ENST00000550863 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
CPNE8-207ENST00000550863 SSFA2P28290 1259 aa15.61■□□□□ 0.09
CPNE8-207ENST00000550863 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
CPNE8-207ENST00000550863 ERVV-2B6SEH9 535 aa15.6■□□□□ 0.09
CPNE8-207ENST00000550863 PTCD1O75127 700 aaKnown RBP15.6■□□□□ 0.09
CPNE8-207ENST00000550863 CABP4P57796 275 aa15.6■□□□□ 0.09
CPNE8-207ENST00000550863 C1orf141Q5JVX7 400 aa15.6■□□□□ 0.09
CPNE8-207ENST00000550863 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
CPNE8-207ENST00000550863 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
CPNE8-207ENST00000550863 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
CPNE8-207ENST00000550863 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
CPNE8-207ENST00000550863 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
CPNE8-207ENST00000550863 PXDNLA1KZ92 1463 aa15.58■□□□□ 0.08
CPNE8-207ENST00000550863 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
CPNE8-207ENST00000550863 MMP10P09238 476 aa15.56■□□□□ 0.08
CPNE8-207ENST00000550863 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
CPNE8-207ENST00000550863 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
CPNE8-207ENST00000550863 CNTNAP4Q9C0A0 1308 aa15.56■□□□□ 0.08
CPNE8-207ENST00000550863 ARFGEF1Q9Y6D6 1849 aa15.55■□□□□ 0.08
CPNE8-207ENST00000550863 C10orf71Q711Q0 1435 aa15.55■□□□□ 0.08
CPNE8-207ENST00000550863 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
CPNE8-207ENST00000550863 AKAP4Q5JQC9 854 aa15.55■□□□□ 0.08
CPNE8-207ENST00000550863 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
CPNE8-207ENST00000550863 SCN7AQ01118 1682 aa15.54■□□□□ 0.08
CPNE8-207ENST00000550863 NPC1L1Q9UHC9 1359 aa15.54■□□□□ 0.08
CPNE8-207ENST00000550863 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
CPNE8-207ENST00000550863 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
CPNE8-207ENST00000550863 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
CPNE8-207ENST00000550863 RTCBQ9Y3I0 505 aaKnown RBP15.54■□□□□ 0.08
CPNE8-207ENST00000550863 CD2APQ9Y5K6 639 aa15.54■□□□□ 0.08
CPNE8-207ENST00000550863 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
CPNE8-207ENST00000550863 GYS1P13807 737 aa15.53■□□□□ 0.08
CPNE8-207ENST00000550863 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
CPNE8-207ENST00000550863 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
CPNE8-207ENST00000550863 CACNA1SQ13698 1873 aa15.52■□□□□ 0.08
CPNE8-207ENST00000550863 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.08
CPNE8-207ENST00000550863 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
CPNE8-207ENST00000550863 NRXN2Q9P2S2 1712 aa15.51■□□□□ 0.07
CPNE8-207ENST00000550863 RPS6KA4O75676 772 aa15.51■□□□□ 0.07
CPNE8-207ENST00000550863 TRAPPC3LQ5T215 181 aa15.51■□□□□ 0.07
CPNE8-207ENST00000550863 BCORQ6W2J9 1755 aa15.51■□□□□ 0.07
CPNE8-207ENST00000550863 ADCY9O60503 1353 aa15.5■□□□□ 0.07
CPNE8-207ENST00000550863 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
CPNE8-207ENST00000550863 RC3H1Q5TC82 1133 aaKnown RBP15.5■□□□□ 0.07
CPNE8-207ENST00000550863 INTS5Q6P9B9 1019 aaKnown RBP15.5■□□□□ 0.07
CPNE8-207ENST00000550863 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
CPNE8-207ENST00000550863 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
CPNE8-207ENST00000550863 DDR1Q08345 913 aa15.49■□□□□ 0.07
CPNE8-207ENST00000550863 RFC4P35249 363 aa15.48■□□□□ 0.07
CPNE8-207ENST00000550863 FKBP8Q14318 412 aa15.48■□□□□ 0.07
CPNE8-207ENST00000550863 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
CPNE8-207ENST00000550863 COL15A1P39059 1388 aa15.48■□□□□ 0.07
CPNE8-207ENST00000550863 A0A0G2JLW4 131 aa15.47■□□□□ 0.07
CPNE8-207ENST00000550863 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
CPNE8-207ENST00000550863 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
CPNE8-207ENST00000550863 SOS1Q07889 1333 aaPredicted RBP15.46■□□□□ 0.07
CPNE8-207ENST00000550863 SBF1O95248 1867 aa15.46■□□□□ 0.07
CPNE8-207ENST00000550863 GRIN3BO60391 1043 aa15.46■□□□□ 0.07
CPNE8-207ENST00000550863 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
CPNE8-207ENST00000550863 ADRA2BP18089 450 aa15.46■□□□□ 0.07
CPNE8-207ENST00000550863 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
CPNE8-207ENST00000550863 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
CPNE8-207ENST00000550863 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
CPNE8-207ENST00000550863 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
CPNE8-207ENST00000550863 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
CPNE8-207ENST00000550863 HMGB2P26583 209 aaKnown RBP15.45■□□□□ 0.06
CPNE8-207ENST00000550863 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms