RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PTCD1O75127 700 aaKnown RBP18.19■□□□□ 0.5
TROAP-213ENST00000550709 TEFQ10587 303 aa18.19■□□□□ 0.5
TROAP-213ENST00000550709 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
TROAP-213ENST00000550709 MCM10Q7L590 875 aa18.19■□□□□ 0.5
TROAP-213ENST00000550709 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
TROAP-213ENST00000550709 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
TROAP-213ENST00000550709 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
TROAP-213ENST00000550709 SLC15A2Q16348 729 aa18.18■□□□□ 0.5
TROAP-213ENST00000550709 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
TROAP-213ENST00000550709 TFCP2L1Q9NZI6 479 aa18.16■□□□□ 0.5
TROAP-213ENST00000550709 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
TROAP-213ENST00000550709 ITPK1Q13572 414 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 AKT1S1Q96B36 256 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 PDGFDQ9GZP0 370 aaPredicted RBP18.15■□□□□ 0.5
TROAP-213ENST00000550709 RREB1Q92766 1687 aa18.15■□□□□ 0.5
TROAP-213ENST00000550709 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.49
TROAP-213ENST00000550709 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
TROAP-213ENST00000550709 RIPK4P57078 832 aa18.14■□□□□ 0.49
TROAP-213ENST00000550709 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
TROAP-213ENST00000550709 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
TROAP-213ENST00000550709 NUP188Q5SRE5 1749 aa18.14■□□□□ 0.49
TROAP-213ENST00000550709 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
TROAP-213ENST00000550709 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
TROAP-213ENST00000550709 RGPD3A6NKT7 1758 aaPredicted RBP18.12■□□□□ 0.49
TROAP-213ENST00000550709 RGPD4Q7Z3J3 1758 aa18.12■□□□□ 0.49
TROAP-213ENST00000550709 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
TROAP-213ENST00000550709 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
TROAP-213ENST00000550709 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
TROAP-213ENST00000550709 AK7Q96M32 723 aa18.11■□□□□ 0.49
TROAP-213ENST00000550709 ITGB4P16144 1822 aa18.11■□□□□ 0.49
TROAP-213ENST00000550709 SENP3-EIF4A1A0A087X0R7 540 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 MSH5O43196 834 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 KCNQ3O43525 872 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 ZBTB7AO95365 584 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
TROAP-213ENST00000550709 MRC1P22897 1456 aa18.09■□□□□ 0.49
TROAP-213ENST00000550709 APAF1O14727 1248 aa18.09■□□□□ 0.49
TROAP-213ENST00000550709 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
TROAP-213ENST00000550709 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
TROAP-213ENST00000550709 PHF14O94880 888 aa18.08■□□□□ 0.48
TROAP-213ENST00000550709 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
TROAP-213ENST00000550709 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.48
TROAP-213ENST00000550709 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.48
TROAP-213ENST00000550709 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
TROAP-213ENST00000550709 GNPATO15228 680 aa18.07■□□□□ 0.48
TROAP-213ENST00000550709 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
TROAP-213ENST00000550709 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
TROAP-213ENST00000550709 FAM9BQ8IZU0 186 aa18.07■□□□□ 0.48
TROAP-213ENST00000550709 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
TROAP-213ENST00000550709 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
TROAP-213ENST00000550709 COL23A1Q86Y22 540 aaPredicted RBP18.06■□□□□ 0.48
TROAP-213ENST00000550709 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
TROAP-213ENST00000550709 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
TROAP-213ENST00000550709 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
TROAP-213ENST00000550709 LY75O60449 1722 aa18.05■□□□□ 0.48
TROAP-213ENST00000550709 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
TROAP-213ENST00000550709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
TROAP-213ENST00000550709 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
TROAP-213ENST00000550709 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
TROAP-213ENST00000550709 ADAMTS7Q9UKP4 1686 aa18.03■□□□□ 0.48
TROAP-213ENST00000550709 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
TROAP-213ENST00000550709 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
TROAP-213ENST00000550709 FLAD1Q8NFF5 587 aa18.02■□□□□ 0.48
TROAP-213ENST00000550709 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
TROAP-213ENST00000550709 RTCBQ9Y3I0 505 aaKnown RBP18.02■□□□□ 0.48
TROAP-213ENST00000550709 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
TROAP-213ENST00000550709 HEG1Q9ULI3 1381 aa18.02■□□□□ 0.47
TROAP-213ENST00000550709 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
TROAP-213ENST00000550709 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
TROAP-213ENST00000550709 MSL1Q68DK7 614 aa18.01■□□□□ 0.47
TROAP-213ENST00000550709 INTS5Q6P9B9 1019 aaKnown RBP18.01■□□□□ 0.47
TROAP-213ENST00000550709 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
TROAP-213ENST00000550709 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
TROAP-213ENST00000550709 KCPQ6ZWJ8 1503 aa18.01■□□□□ 0.47
TROAP-213ENST00000550709 PRAMEF22A3QJZ6 481 aa18■□□□□ 0.47
TROAP-213ENST00000550709 RPS6KA4O75676 772 aa18■□□□□ 0.47
TROAP-213ENST00000550709 STARD3NLO95772 234 aa18■□□□□ 0.47
TROAP-213ENST00000550709 SSFA2P28290 1259 aa18■□□□□ 0.47
TROAP-213ENST00000550709 SNRPA1P09661 255 aaKnown RBP17.99■□□□□ 0.47
TROAP-213ENST00000550709 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
TROAP-213ENST00000550709 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
TROAP-213ENST00000550709 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
TROAP-213ENST00000550709 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
TROAP-213ENST00000550709 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
TROAP-213ENST00000550709 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
TROAP-213ENST00000550709 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
TROAP-213ENST00000550709 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
TROAP-213ENST00000550709 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
TROAP-213ENST00000550709 C5P01031 1676 aa17.97■□□□□ 0.47
TROAP-213ENST00000550709 A1BGP04217 495 aa17.97■□□□□ 0.47
TROAP-213ENST00000550709 PTGER2P43116 358 aa17.97■□□□□ 0.47
TROAP-213ENST00000550709 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
TROAP-213ENST00000550709 MIER1Q8N108 512 aa17.97■□□□□ 0.47
TROAP-213ENST00000550709 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
TROAP-213ENST00000550709 RFC4P35249 363 aa17.96■□□□□ 0.47
TROAP-213ENST00000550709 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms