RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
TMEM106C-215ENST00000550552 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
TMEM106C-215ENST00000550552 CCDC184Q52MB2 194 aa8.65□□□□□ -1.02
TMEM106C-215ENST00000550552 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
TMEM106C-215ENST00000550552 AMIGO3Q86WK7 504 aa8.65□□□□□ -1.02
TMEM106C-215ENST00000550552 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
TMEM106C-215ENST00000550552 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 ATP6V1AP38606 617 aa8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 SLC39A6Q13433 755 aa8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 TFCP2L1Q9NZI6 479 aa8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
TMEM106C-215ENST00000550552 MAP3K5Q99683 1374 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 PNPLA7Q6ZV29 1317 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 PAPPAQ13219 1627 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 ZBTB7AO95365 584 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 MCM10Q7L590 875 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 ITGB4P16144 1822 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 LY75O60449 1722 aa8.63□□□□□ -1.03
TMEM106C-215ENST00000550552 CEMIPQ8WUJ3 1361 aa8.62□□□□□ -1.03
TMEM106C-215ENST00000550552 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
TMEM106C-215ENST00000550552 KCNQ3O43525 872 aa8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 HTATSF1O43719 755 aaKnown RBP8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 PTGER2P43116 358 aa8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 TEFQ10587 303 aa8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 SGIP1Q9BQI5 828 aa8.61□□□□□ -1.03
TMEM106C-215ENST00000550552 NFE2L2Q16236 605 aa8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 RTF1Q92541 710 aaKnown RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 THUMPD2Q9BTF0 503 aaKnown RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 MTFR1LQ9H019 292 aa8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 PNNQ9H307 717 aaKnown RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 MIS18AQ9NYP9 233 aa8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
TMEM106C-215ENST00000550552 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 MRC1P22897 1456 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 MSH5O43196 834 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 ANP32CO43423 234 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 PHF14O94880 888 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 CYP19A1P11511 503 aaPredicted RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 HMGB2P26583 209 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 RIPK4P57078 832 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 SLC16A10Q8TF71 515 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 AK7Q96M32 723 aa8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-215ENST00000550552 SCN11AQ9UI33 1791 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 GNPATO15228 680 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 NEFMP07197 916 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 TAF7Q15545 349 aaPredicted RBP8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 FLAD1Q8NFF5 587 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 PNISRQ8TF01 805 aaKnown RBP8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 CASZ1Q86V15 1759 aa8.58□□□□□ -1.04
TMEM106C-215ENST00000550552 CNTNAP4Q9C0A0 1308 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 MAPK8IP3Q9UPT6 1336 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 PRAMEF22A3QJZ6 481 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 SSFA2P28290 1259 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 ARHGEF1Q92888 912 aaKnown RBP8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
TMEM106C-215ENST00000550552 APAF1O14727 1248 aa8.56□□□□□ -1.04
TMEM106C-215ENST00000550552 FMNL2Q96PY5 1086 aa8.56□□□□□ -1.04
TMEM106C-215ENST00000550552 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
TMEM106C-215ENST00000550552 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
TMEM106C-215ENST00000550552 C5P01031 1676 aa8.56□□□□□ -1.04
TMEM106C-215ENST00000550552 LRP5O75197 1615 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 TAF1LQ8IZX4 1826 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 A1BGP04217 495 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 ARXQ96QS3 562 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 MRS2Q9HD23 443 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 PPP1R1BQ9UD71 204 aaPredicted RBP8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 HEG1Q9ULI3 1381 aa8.55□□□□□ -1.04
TMEM106C-215ENST00000550552 GOLGB1Q14789 3259 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-215ENST00000550552 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
TMEM106C-215ENST00000550552 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
TMEM106C-215ENST00000550552 STARD3NLO95772 234 aa8.54□□□□□ -1.04
TMEM106C-215ENST00000550552 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-215ENST00000550552 GYS1P13807 737 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms