RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 PANK3Q9H999 370 aa19.45■□□□□ 0.7
TPCN1-213ENST00000550543 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
TPCN1-213ENST00000550543 MAP2P11137 1827 aaKnown RBP19.45■□□□□ 0.7
TPCN1-213ENST00000550543 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
TPCN1-213ENST00000550543 RC3H1Q5TC82 1133 aaKnown RBP19.44■□□□□ 0.7
TPCN1-213ENST00000550543 MORC1Q86VD1 984 aa19.44■□□□□ 0.7
TPCN1-213ENST00000550543 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
TPCN1-213ENST00000550543 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
TPCN1-213ENST00000550543 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
TPCN1-213ENST00000550543 TRAPPC3LQ5T215 181 aa19.43■□□□□ 0.7
TPCN1-213ENST00000550543 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
TPCN1-213ENST00000550543 CABP4P57796 275 aa19.42■□□□□ 0.7
TPCN1-213ENST00000550543 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
TPCN1-213ENST00000550543 ITPK1Q13572 414 aa19.41■□□□□ 0.7
TPCN1-213ENST00000550543 GPBP1L1Q9HC44 474 aaPredicted RBP19.41■□□□□ 0.7
TPCN1-213ENST00000550543 UBR3Q6ZT12 1888 aa19.41■□□□□ 0.7
TPCN1-213ENST00000550543 MTHFSP49914 203 aa19.4■□□□□ 0.7
TPCN1-213ENST00000550543 TGFB2P61812 414 aa19.4■□□□□ 0.7
TPCN1-213ENST00000550543 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
TPCN1-213ENST00000550543 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
TPCN1-213ENST00000550543 KDRP35968 1356 aa19.4■□□□□ 0.7
TPCN1-213ENST00000550543 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
TPCN1-213ENST00000550543 MMP10P09238 476 aa19.39■□□□□ 0.69
TPCN1-213ENST00000550543 RFC4P35249 363 aa19.38■□□□□ 0.69
TPCN1-213ENST00000550543 ZNF831Q5JPB2 1677 aa19.38■□□□□ 0.69
TPCN1-213ENST00000550543 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
TPCN1-213ENST00000550543 CCDC87Q9NVE4 849 aa19.38■□□□□ 0.69
TPCN1-213ENST00000550543 RPS6KA4O75676 772 aa19.37■□□□□ 0.69
TPCN1-213ENST00000550543 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
TPCN1-213ENST00000550543 ADCY9O60503 1353 aa19.35■□□□□ 0.69
TPCN1-213ENST00000550543 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
TPCN1-213ENST00000550543 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.68
TPCN1-213ENST00000550543 ARHGEF1Q92888 912 aaKnown RBP19.33■□□□□ 0.68
TPCN1-213ENST00000550543 KDM6AO15550 1401 aaPredicted RBP19.32■□□□□ 0.68
TPCN1-213ENST00000550543 AKAP4Q5JQC9 854 aa19.31■□□□□ 0.68
TPCN1-213ENST00000550543 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
TPCN1-213ENST00000550543 GYS1P13807 737 aa19.3■□□□□ 0.68
TPCN1-213ENST00000550543 SMIM5Q71RC9 77 aa19.3■□□□□ 0.68
TPCN1-213ENST00000550543 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
TPCN1-213ENST00000550543 C10orf71Q711Q0 1435 aa19.3■□□□□ 0.68
TPCN1-213ENST00000550543 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
TPCN1-213ENST00000550543 IL13P35225 146 aa19.29■□□□□ 0.68
TPCN1-213ENST00000550543 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
TPCN1-213ENST00000550543 SLC4A9Q96Q91 983 aa19.29■□□□□ 0.68
TPCN1-213ENST00000550543 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
TPCN1-213ENST00000550543 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
TPCN1-213ENST00000550543 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
TPCN1-213ENST00000550543 CICQ96RK0 1608 aaPredicted RBP19.28■□□□□ 0.68
TPCN1-213ENST00000550543 AMER1Q5JTC6 1135 aaPredicted RBP19.27■□□□□ 0.68
TPCN1-213ENST00000550543 SLC52A2Q9HAB3 445 aa19.26■□□□□ 0.67
TPCN1-213ENST00000550543 ZPR1O75312 459 aa19.25■□□□□ 0.67
TPCN1-213ENST00000550543 FCHSD2O94868 740 aa19.25■□□□□ 0.67
TPCN1-213ENST00000550543 HSPA6P17066 643 aa19.25■□□□□ 0.67
TPCN1-213ENST00000550543 ZNF526Q8TF50 670 aaPredicted RBP19.25■□□□□ 0.67
TPCN1-213ENST00000550543 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
TPCN1-213ENST00000550543 COL5A3P25940 1745 aaPredicted RBP19.25■□□□□ 0.67
TPCN1-213ENST00000550543 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
TPCN1-213ENST00000550543 KIF13BQ9NQT8 1826 aa19.24■□□□□ 0.67
TPCN1-213ENST00000550543 A0A0G2JLW4 131 aa19.24■□□□□ 0.67
TPCN1-213ENST00000550543 WWC3Q9ULE0 1092 aa19.24■□□□□ 0.67
TPCN1-213ENST00000550543 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
TPCN1-213ENST00000550543 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
TPCN1-213ENST00000550543 DPEP1P16444 411 aa19.23■□□□□ 0.67
TPCN1-213ENST00000550543 ARHGAP27Q6ZUM4 889 aa19.23■□□□□ 0.67
TPCN1-213ENST00000550543 DALRD3Q5D0E6 543 aaKnown RBP19.22■□□□□ 0.67
TPCN1-213ENST00000550543 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
TPCN1-213ENST00000550543 KIF7Q2M1P5 1343 aa19.21■□□□□ 0.67
TPCN1-213ENST00000550543 RNMTO43148 476 aaKnown RBP19.2■□□□□ 0.66
TPCN1-213ENST00000550543 NPC1L1Q9UHC9 1359 aa19.19■□□□□ 0.66
TPCN1-213ENST00000550543 TOMM70O94826 608 aa19.19■□□□□ 0.66
TPCN1-213ENST00000550543 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
TPCN1-213ENST00000550543 TTC5Q8N0Z6 440 aa19.19■□□□□ 0.66
TPCN1-213ENST00000550543 MRC1P22897 1456 aa19.19■□□□□ 0.66
TPCN1-213ENST00000550543 STARD3NLO95772 234 aa19.18■□□□□ 0.66
TPCN1-213ENST00000550543 FKBP8Q14318 412 aa19.18■□□□□ 0.66
TPCN1-213ENST00000550543 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
TPCN1-213ENST00000550543 A0A087WZG4 1122 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 KIF3CO14782 793 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 APLP1P51693 650 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
TPCN1-213ENST00000550543 SRP68Q9UHB9 627 aaKnown RBP19.17■□□□□ 0.66
TPCN1-213ENST00000550543 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 KDM2BQ8NHM5 1336 aa19.17■□□□□ 0.66
TPCN1-213ENST00000550543 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
TPCN1-213ENST00000550543 HMOX1P09601 288 aa19.16■□□□□ 0.66
TPCN1-213ENST00000550543 CYP19A1P11511 503 aaPredicted RBP19.16■□□□□ 0.66
TPCN1-213ENST00000550543 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
TPCN1-213ENST00000550543 POLRMTO00411 1230 aaKnown RBP19.15■□□□□ 0.66
TPCN1-213ENST00000550543 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
TPCN1-213ENST00000550543 TM4SF1P30408 202 aa19.15■□□□□ 0.66
TPCN1-213ENST00000550543 DDR1Q08345 913 aa19.15■□□□□ 0.66
TPCN1-213ENST00000550543 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
TPCN1-213ENST00000550543 LGR6Q9HBX8 967 aa19.15■□□□□ 0.66
TPCN1-213ENST00000550543 PDZRN3Q9UPQ7 1066 aa19.15■□□□□ 0.66
TPCN1-213ENST00000550543 ZC3H4Q9UPT8 1303 aaKnown RBP19.15■□□□□ 0.66
TPCN1-213ENST00000550543 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
TPCN1-213ENST00000550543 KCNA3P22001 575 aa19.14■□□□□ 0.65
TPCN1-213ENST00000550543 TEFQ10587 303 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms