RNA–Protein interactions for RNA: ENST00000550415.2

RPL3P13-201, Transcript of ribosomal protein L3 pseudogene 13, humanhuman

BASIC

Gene RPL3P13, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P13-201ENST00000550415 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
RPL3P13-201ENST00000550415 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
RPL3P13-201ENST00000550415 BCL9O00512 1426 aa8.85□□□□□ -0.99
RPL3P13-201ENST00000550415 MAP2P11137 1827 aaKnown RBP8.84□□□□□ -0.99
RPL3P13-201ENST00000550415 OVOS2A0A0G2JMS6 1433 aa8.84□□□□□ -0.99
RPL3P13-201ENST00000550415 TNS2Q63HR2 1409 aa8.84□□□□□ -0.99
RPL3P13-201ENST00000550415 LRRC37A3O60309 1634 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 PEAK1Q9H792 1746 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
RPL3P13-201ENST00000550415 HSP90AB2PQ58FF8 381 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 RAPGEF4Q8WZA2 1011 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 LTV1Q96GA3 475 aaPredicted RBP8.83□□□□□ -1
RPL3P13-201ENST00000550415 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 RGPD1P0DJD0 1748 aa8.83□□□□□ -1
RPL3P13-201ENST00000550415 NCAPD2Q15021 1401 aa8.82□□□□□ -1
RPL3P13-201ENST00000550415 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
RPL3P13-201ENST00000550415 TATP17735 454 aaPredicted RBP8.81□□□□□ -1
RPL3P13-201ENST00000550415 FBLN1P23142 703 aa8.81□□□□□ -1
RPL3P13-201ENST00000550415 BAG6P46379 1132 aa8.81□□□□□ -1
RPL3P13-201ENST00000550415 FXR2P51116 673 aaKnown RBP eCLIP8.81□□□□□ -1
RPL3P13-201ENST00000550415 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
RPL3P13-201ENST00000550415 PARD3Q8TEW0 1356 aa8.81□□□□□ -1
RPL3P13-201ENST00000550415 RBM26Q5T8P6 1007 aaKnown RBP8.8□□□□□ -1
RPL3P13-201ENST00000550415 NBPF6Q5VWK0 638 aa8.8□□□□□ -1
RPL3P13-201ENST00000550415 NBPF4Q96M43 638 aa8.8□□□□□ -1
RPL3P13-201ENST00000550415 CFAP53Q96M91 514 aa8.8□□□□□ -1
RPL3P13-201ENST00000550415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -1
RPL3P13-201ENST00000550415 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
RPL3P13-201ENST00000550415 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
RPL3P13-201ENST00000550415 EP400Q96L91 3159 aa8.79□□□□□ -1
RPL3P13-201ENST00000550415 HMGB2P26583 209 aaKnown RBP8.79□□□□□ -1
RPL3P13-201ENST00000550415 EIF4A2Q14240 407 aaKnown RBP8.79□□□□□ -1
RPL3P13-201ENST00000550415 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
RPL3P13-201ENST00000550415 SPG7Q9UQ90 795 aa8.79□□□□□ -1
RPL3P13-201ENST00000550415 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
RPL3P13-201ENST00000550415 SPDYE16A6NNV3 312 aaPredicted RBP8.78□□□□□ -1
RPL3P13-201ENST00000550415 MTHFSP49914 203 aa8.78□□□□□ -1
RPL3P13-201ENST00000550415 RALBP1Q15311 655 aa8.78□□□□□ -1
RPL3P13-201ENST00000550415 EYA1Q99502 592 aa8.78□□□□□ -1
RPL3P13-201ENST00000550415 ZMYND15Q9H091 742 aa8.78□□□□□ -1
RPL3P13-201ENST00000550415 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
RPL3P13-201ENST00000550415 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
RPL3P13-201ENST00000550415 RGPD2P0DJD1 1756 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 MEGF6O75095 1541 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 DIAPH1O60610 1272 aaKnown RBP8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 MKRN3Q13064 507 aaKnown RBP8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 NUDCQ9Y266 331 aa8.77□□□□□ -1.01
RPL3P13-201ENST00000550415 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 KDRP35968 1356 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 ZNF316A6NFI3 1004 aaPredicted RBP8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 TRIM37O94972 964 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 HSP90AB1P08238 724 aaKnown RBP8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 IL13P35225 146 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 USHBP1Q8N6Y0 703 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 PKD1L3Q7Z443 1732 aa8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 TNS1Q9HBL0 1735 aaKnown RBP8.76□□□□□ -1.01
RPL3P13-201ENST00000550415 NHSQ6T4R5 1651 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 TRIM66O15016 1216 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 PLSCR1O15162 318 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 APBA3O96018 575 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 PDE4DQ08499 809 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 GPHNQ9NQX3 736 aaPredicted RBP8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
RPL3P13-201ENST00000550415 FAM182BQ5T319 152 aa8.74□□□□□ -1.01
RPL3P13-201ENST00000550415 IFNL2Q8IZJ0 200 aa8.74□□□□□ -1.01
RPL3P13-201ENST00000550415 TMEM106CQ9BVX2 250 aa8.74□□□□□ -1.01
RPL3P13-201ENST00000550415 COL3A1P02461 1466 aaPredicted RBP8.73□□□□□ -1.01
RPL3P13-201ENST00000550415 SULT6B1Q6IMI4 303 aa8.73□□□□□ -1.01
RPL3P13-201ENST00000550415 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
RPL3P13-201ENST00000550415 NEFMP07197 916 aa8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 PDIA6Q15084 440 aa8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 PNNQ9H307 717 aaKnown RBP8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 MYBBP1AQ9BQG0 1328 aaKnown RBP8.72□□□□□ -1.01
RPL3P13-201ENST00000550415 U2SURPO15042 1029 aaKnown RBP8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 CYP27B1O15528 508 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 PHKG2P15735 406 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 CAMKK2Q96RR4 588 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 KAT6BQ8WYB5 2073 aa8.71□□□□□ -1.02
RPL3P13-201ENST00000550415 RREB1Q92766 1687 aa8.7□□□□□ -1.02
RPL3P13-201ENST00000550415 ERVV-2B6SEH9 535 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms