RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CACNB3-214ENST00000550168 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
CACNB3-214ENST00000550168 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
CACNB3-214ENST00000550168 PLIN1O60240 522 aa16.1■□□□□ 0.17
CACNB3-214ENST00000550168 VAMP4O75379 141 aa16.1■□□□□ 0.17
CACNB3-214ENST00000550168 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
CACNB3-214ENST00000550168 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
CACNB3-214ENST00000550168 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
CACNB3-214ENST00000550168 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
CACNB3-214ENST00000550168 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 TNS4Q8IZW8 715 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
CACNB3-214ENST00000550168 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
CACNB3-214ENST00000550168 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
CACNB3-214ENST00000550168 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
CACNB3-214ENST00000550168 HOXB7P09629 217 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 HSPA6P17066 643 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 TEFQ10587 303 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
CACNB3-214ENST00000550168 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-214ENST00000550168 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
CACNB3-214ENST00000550168 EVA1CP58658 441 aa16.06■□□□□ 0.16
CACNB3-214ENST00000550168 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
CACNB3-214ENST00000550168 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
CACNB3-214ENST00000550168 MEGF6O75095 1541 aa16.05■□□□□ 0.16
CACNB3-214ENST00000550168 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
CACNB3-214ENST00000550168 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
CACNB3-214ENST00000550168 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
CACNB3-214ENST00000550168 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
CACNB3-214ENST00000550168 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
CACNB3-214ENST00000550168 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
CACNB3-214ENST00000550168 PTPRCP08575 1304 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 IL2RBP14784 551 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 PHKG2P15735 406 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
CACNB3-214ENST00000550168 KCNQ2O43526 872 aa16.02■□□□□ 0.16
CACNB3-214ENST00000550168 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.16
CACNB3-214ENST00000550168 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
CACNB3-214ENST00000550168 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
CACNB3-214ENST00000550168 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
CACNB3-214ENST00000550168 MRC1P22897 1456 aa16.02■□□□□ 0.15
CACNB3-214ENST00000550168 GLI3P10071 1580 aa16.01■□□□□ 0.15
CACNB3-214ENST00000550168 TRIM27P14373 513 aa16.01■□□□□ 0.15
CACNB3-214ENST00000550168 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
CACNB3-214ENST00000550168 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
CACNB3-214ENST00000550168 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
CACNB3-214ENST00000550168 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
CACNB3-214ENST00000550168 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
CACNB3-214ENST00000550168 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
CACNB3-214ENST00000550168 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
CACNB3-214ENST00000550168 PLCH1Q4KWH8 1693 aa15.99■□□□□ 0.15
CACNB3-214ENST00000550168 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
CACNB3-214ENST00000550168 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CACNB3-214ENST00000550168 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-214ENST00000550168 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CACNB3-214ENST00000550168 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
CACNB3-214ENST00000550168 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
CACNB3-214ENST00000550168 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
CACNB3-214ENST00000550168 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
CACNB3-214ENST00000550168 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
CACNB3-214ENST00000550168 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
CACNB3-214ENST00000550168 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CACNB3-214ENST00000550168 ABCC4O15439 1325 aa15.97■□□□□ 0.15
CACNB3-214ENST00000550168 DISP2A7MBM2 1401 aa15.97■□□□□ 0.15
CACNB3-214ENST00000550168 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
CACNB3-214ENST00000550168 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-214ENST00000550168 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
CACNB3-214ENST00000550168 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
CACNB3-214ENST00000550168 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
CACNB3-214ENST00000550168 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
CACNB3-214ENST00000550168 KDM6AO15550 1401 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-214ENST00000550168 SIPA1L3O60292 1781 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-214ENST00000550168 EZH2Q15910 746 aaKnown RBP15.96■□□□□ 0.15
CACNB3-214ENST00000550168 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
CACNB3-214ENST00000550168 CYP27B1O15528 508 aa15.95■□□□□ 0.14
CACNB3-214ENST00000550168 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CACNB3-214ENST00000550168 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
CACNB3-214ENST00000550168 RLBP1P12271 317 aa15.94■□□□□ 0.14
CACNB3-214ENST00000550168 ITPRIPQ8IWB1 547 aa15.94■□□□□ 0.14
CACNB3-214ENST00000550168 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
CACNB3-214ENST00000550168 SLIT2O94813 1529 aa15.94■□□□□ 0.14
CACNB3-214ENST00000550168 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CACNB3-214ENST00000550168 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
CACNB3-214ENST00000550168 CABP4P57796 275 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 HDGFL1Q5TGJ6 251 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
CACNB3-214ENST00000550168 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
CACNB3-214ENST00000550168 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
CACNB3-214ENST00000550168 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms