RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 IQGAP3Q86VI3 1631 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 STRCQ7RTU9 1775 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 TK2O00142 265 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
EFCAB11-203ENST00000550103 E9PCH4 1651 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 USP17L3A6NCW0 530 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 USP17L4A6NCW7 530 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 LZTS3O60299 673 aaPredicted RBP9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 F12P00748 615 aaPredicted RBP9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 SKIP12755 728 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 PTPRNQ16849 979 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 USP17L1Q7RTZ2 530 aa9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 NOVA2Q9UNW9 492 aaKnown RBP9.78□□□□□ -0.84
EFCAB11-203ENST00000550103 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.84
EFCAB11-203ENST00000550103 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 KIF3BO15066 747 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 GGT6Q6P531 493 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 RNF19BQ6ZMZ0 732 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 ARMC2Q8NEN0 867 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
EFCAB11-203ENST00000550103 VWDEQ8N2E2 1590 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 NCOA1Q15788 1441 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 JUNDP17535 347 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 TMEM164Q5U3C3 297 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 ZNF687Q8N1G0 1237 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 ZMIZ1Q9ULJ6 1067 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 PZPP20742 1482 aa9.76□□□□□ -0.85
EFCAB11-203ENST00000550103 SPATA31D1Q6ZQQ2 1576 aa9.75□□□□□ -0.85
EFCAB11-203ENST00000550103 PIK3C2BO00750 1634 aa9.75□□□□□ -0.85
EFCAB11-203ENST00000550103 PTK2Q05397 1052 aa9.75□□□□□ -0.85
EFCAB11-203ENST00000550103 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
EFCAB11-203ENST00000550103 NR1I2O75469 434 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 CEBPAP49715 358 aaPredicted RBP9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 SLFNL1Q499Z3 407 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 LARP1Q6PKG0 1096 aaKnown RBP9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 TXNDC2Q86VQ3 553 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 SCUBE3Q8IX30 993 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 MKRN1Q9UHC7 482 aaKnown RBP9.74□□□□□ -0.85
EFCAB11-203ENST00000550103 NPATQ14207 1427 aa9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 ATP5J2-PTCD1G3V325 749 aa9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 STK32AQ8WU08 396 aa9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 THAP11Q96EK4 314 aa9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 KDM5AP29375 1690 aaKnown RBP9.73□□□□□ -0.85
EFCAB11-203ENST00000550103 KIF1BO60333 1816 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 ERVK-7P63135 1459 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 SYNMO15061 1565 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L10C9JJH3 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L12C9JPN9 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L11C9JVI0 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L21D6R901 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L18D6R9N7 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L22D6RA61 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L17D6RBQ6 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L19D6RCP7 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L20D6RJB6 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 CTHP32929 405 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 PPP4CP60510 307 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 FAM200AQ8TCP9 573 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 ZMYM3Q14202 1370 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 LMTK2Q8IWU2 1503 aa9.72□□□□□ -0.85
EFCAB11-203ENST00000550103 ERCC3P19447 782 aa9.71□□□□□ -0.86
EFCAB11-203ENST00000550103 SSFA2P28290 1259 aa9.71□□□□□ -0.86
EFCAB11-203ENST00000550103 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
EFCAB11-203ENST00000550103 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.86
EFCAB11-203ENST00000550103 KANK1Q14678 1352 aa9.71□□□□□ -0.86
EFCAB11-203ENST00000550103 RASA1P20936 1047 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 PTK7Q13308 1070 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 PCDHB3Q9Y5E6 796 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 IQGAP1P46940 1657 aa9.7□□□□□ -0.86
EFCAB11-203ENST00000550103 CCNYL3P0C7X3 344 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 CRTC2Q53ET0 693 aaPredicted RBP9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 PHLDB3Q6NSJ2 640 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms