RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
CHMP1A-208ENST00000550102 MTHFSDQ2M296 383 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-208ENST00000550102 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
CHMP1A-208ENST00000550102 ATG3Q9NT62 314 aa23.08■■□□□ 1.29
CHMP1A-208ENST00000550102 SIPA1L3O60292 1781 aaPredicted RBP23.08■■□□□ 1.29
CHMP1A-208ENST00000550102 PPP1R1BQ9UD71 204 aaPredicted RBP23.07■■□□□ 1.28
CHMP1A-208ENST00000550102 MAP3K5Q99683 1374 aa23.06■■□□□ 1.28
CHMP1A-208ENST00000550102 TJP1Q07157 1748 aa23.06■■□□□ 1.28
CHMP1A-208ENST00000550102 UBR2Q8IWV8 1755 aa23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 U2AF1L5P0DN76 240 aaPredicted RBP23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 U2AF1Q01081 240 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 RALBP1Q15311 655 aa23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
CHMP1A-208ENST00000550102 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
CHMP1A-208ENST00000550102 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
CHMP1A-208ENST00000550102 NFATC2IPQ8NCF5 419 aa23.03■■□□□ 1.28
CHMP1A-208ENST00000550102 SLC16A10Q8TF71 515 aa23.03■■□□□ 1.28
CHMP1A-208ENST00000550102 AK7Q96M32 723 aa23.03■■□□□ 1.28
CHMP1A-208ENST00000550102 RNMTO43148 476 aaKnown RBP23.02■■□□□ 1.28
CHMP1A-208ENST00000550102 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
CHMP1A-208ENST00000550102 PTGER2P43116 358 aa23.02■■□□□ 1.28
CHMP1A-208ENST00000550102 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
CHMP1A-208ENST00000550102 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
CHMP1A-208ENST00000550102 LINC00116Q8NCU8 138 aa23.01■■□□□ 1.27
CHMP1A-208ENST00000550102 FCHSD2O94868 740 aa23■■□□□ 1.27
CHMP1A-208ENST00000550102 ITPK1Q13572 414 aa23■■□□□ 1.27
CHMP1A-208ENST00000550102 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
CHMP1A-208ENST00000550102 LGR6Q9HBX8 967 aa23■■□□□ 1.27
CHMP1A-208ENST00000550102 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
CHMP1A-208ENST00000550102 FLAD1Q8NFF5 587 aa22.99■■□□□ 1.27
CHMP1A-208ENST00000550102 MYH14Q7Z406 1995 aaKnown RBP22.99■■□□□ 1.27
CHMP1A-208ENST00000550102 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 MSH5O43196 834 aa22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 SGIP1Q9BQI5 828 aa22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 C4AP0C0L4 1744 aa22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 MYBBP1AQ9BQG0 1328 aaKnown RBP22.98■■□□□ 1.27
CHMP1A-208ENST00000550102 COL23A1Q86Y22 540 aaPredicted RBP22.97■■□□□ 1.27
CHMP1A-208ENST00000550102 PTCD1O75127 700 aaKnown RBP22.96■■□□□ 1.27
CHMP1A-208ENST00000550102 SLC4A9Q96Q91 983 aa22.96■■□□□ 1.27
CHMP1A-208ENST00000550102 GNPATO15228 680 aa22.95■■□□□ 1.26
CHMP1A-208ENST00000550102 SSFA2P28290 1259 aa22.95■■□□□ 1.26
CHMP1A-208ENST00000550102 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
CHMP1A-208ENST00000550102 CNTNAP4Q9C0A0 1308 aa22.94■■□□□ 1.26
CHMP1A-208ENST00000550102 POLD1P28340 1107 aa22.94■■□□□ 1.26
CHMP1A-208ENST00000550102 TEFQ10587 303 aa22.94■■□□□ 1.26
CHMP1A-208ENST00000550102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.93■■□□□ 1.26
CHMP1A-208ENST00000550102 PHF14O94880 888 aa22.93■■□□□ 1.26
CHMP1A-208ENST00000550102 NEFMP07197 916 aa22.93■■□□□ 1.26
CHMP1A-208ENST00000550102 AMIGO3Q86WK7 504 aa22.92■■□□□ 1.26
CHMP1A-208ENST00000550102 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
CHMP1A-208ENST00000550102 ARXQ96QS3 562 aa22.92■■□□□ 1.26
CHMP1A-208ENST00000550102 SLC39A6Q13433 755 aa22.9■■□□□ 1.26
CHMP1A-208ENST00000550102 RC3H1Q5TC82 1133 aaKnown RBP22.9■■□□□ 1.26
CHMP1A-208ENST00000550102 MSL1Q68DK7 614 aa22.89■■□□□ 1.25
CHMP1A-208ENST00000550102 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
CHMP1A-208ENST00000550102 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
CHMP1A-208ENST00000550102 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
CHMP1A-208ENST00000550102 FHDC1Q9C0D6 1143 aaPredicted RBP22.88■■□□□ 1.25
CHMP1A-208ENST00000550102 PNNQ9H307 717 aaKnown RBP22.88■■□□□ 1.25
CHMP1A-208ENST00000550102 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
CHMP1A-208ENST00000550102 MAPK8IP3Q9UPT6 1336 aa22.87■■□□□ 1.25
CHMP1A-208ENST00000550102 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
CHMP1A-208ENST00000550102 SMIM5Q71RC9 77 aa22.87■■□□□ 1.25
CHMP1A-208ENST00000550102 ADRA2BP18089 450 aa22.86■■□□□ 1.25
CHMP1A-208ENST00000550102 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
CHMP1A-208ENST00000550102 HTATSF1O43719 755 aaKnown RBP22.85■■□□□ 1.25
CHMP1A-208ENST00000550102 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
CHMP1A-208ENST00000550102 KDM3BQ7LBC6 1761 aa22.85■■□□□ 1.25
CHMP1A-208ENST00000550102 DCAF8L1A6NGE4 600 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 RPS6KA4O75676 772 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 MCM10Q7L590 875 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 DNAJC10Q8IXB1 793 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 VSIG10Q8N0Z9 540 aa22.84■■□□□ 1.25
CHMP1A-208ENST00000550102 TRAPPC3LQ5T215 181 aa22.83■■□□□ 1.25
CHMP1A-208ENST00000550102 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.24
CHMP1A-208ENST00000550102 HEG1Q9ULI3 1381 aa22.82■■□□□ 1.24
CHMP1A-208ENST00000550102 NFE2L2Q16236 605 aa22.82■■□□□ 1.24
CHMP1A-208ENST00000550102 SYT17Q9BSW7 474 aa22.82■■□□□ 1.24
CHMP1A-208ENST00000550102 CCDC87Q9NVE4 849 aa22.82■■□□□ 1.24
CHMP1A-208ENST00000550102 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
CHMP1A-208ENST00000550102 KLHL34Q8N239 644 aa22.81■■□□□ 1.24
CHMP1A-208ENST00000550102 BTBD11A6QL63 1104 aa22.8■■□□□ 1.24
CHMP1A-208ENST00000550102 CYP19A1P11511 503 aaPredicted RBP22.8■■□□□ 1.24
CHMP1A-208ENST00000550102 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
CHMP1A-208ENST00000550102 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
CHMP1A-208ENST00000550102 RFC4P35249 363 aa22.79■■□□□ 1.24
CHMP1A-208ENST00000550102 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
CHMP1A-208ENST00000550102 ARHGEF1Q92888 912 aaKnown RBP22.79■■□□□ 1.24
CHMP1A-208ENST00000550102 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
CHMP1A-208ENST00000550102 KIF13BQ9NQT8 1826 aa22.78■■□□□ 1.24
CHMP1A-208ENST00000550102 SCN7AQ01118 1682 aa22.77■■□□□ 1.24
CHMP1A-208ENST00000550102 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
CHMP1A-208ENST00000550102 COL15A1P39059 1388 aa22.76■■□□□ 1.23
CHMP1A-208ENST00000550102 STARD3NLO95772 234 aa22.76■■□□□ 1.23
CHMP1A-208ENST00000550102 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
CHMP1A-208ENST00000550102 ZBTB1Q9Y2K1 713 aa22.75■■□□□ 1.23
CHMP1A-208ENST00000550102 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms