RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
AC055716.1-201ENST00000550077 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
AC055716.1-201ENST00000550077 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
AC055716.1-201ENST00000550077 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
AC055716.1-201ENST00000550077 INSRP06213 1382 aa12.26□□□□□ -0.45
AC055716.1-201ENST00000550077 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
AC055716.1-201ENST00000550077 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 FCHSD2O94868 740 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 TNS4Q8IZW8 715 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 RRAGCQ9HB90 399 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
AC055716.1-201ENST00000550077 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
AC055716.1-201ENST00000550077 PRELPP51888 382 aa12.24□□□□□ -0.45
AC055716.1-201ENST00000550077 TGFB2P61812 414 aa12.24□□□□□ -0.45
AC055716.1-201ENST00000550077 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
AC055716.1-201ENST00000550077 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
AC055716.1-201ENST00000550077 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
AC055716.1-201ENST00000550077 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
AC055716.1-201ENST00000550077 KDRP35968 1356 aa12.22□□□□□ -0.45
AC055716.1-201ENST00000550077 GYS1P13807 737 aa12.22□□□□□ -0.45
AC055716.1-201ENST00000550077 CCDC88AQ3V6T2 1871 aa12.22□□□□□ -0.45
AC055716.1-201ENST00000550077 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
AC055716.1-201ENST00000550077 FLT4P35916 1363 aa12.21□□□□□ -0.45
AC055716.1-201ENST00000550077 TMF1P82094 1093 aa12.21□□□□□ -0.45
AC055716.1-201ENST00000550077 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
AC055716.1-201ENST00000550077 TMOD3Q9NYL9 352 aa12.21□□□□□ -0.45
AC055716.1-201ENST00000550077 PCNTO95613 3336 aa12.21□□□□□ -0.46
AC055716.1-201ENST00000550077 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 CHRNA5P30532 468 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 FSTL1Q12841 308 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 EYA1Q99502 592 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
AC055716.1-201ENST00000550077 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 PHKG2P15735 406 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 DDR1Q08345 913 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
AC055716.1-201ENST00000550077 RASSF7Q02833 373 aa12.18□□□□□ -0.46
AC055716.1-201ENST00000550077 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
AC055716.1-201ENST00000550077 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
AC055716.1-201ENST00000550077 AFDNP55196 1824 aaKnown RBP12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 FKBP8Q14318 412 aa12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 PIM2Q9P1W9 311 aa12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 SPG7Q9UQ90 795 aa12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 TJP1Q07157 1748 aa12.17□□□□□ -0.46
AC055716.1-201ENST00000550077 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
AC055716.1-201ENST00000550077 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
AC055716.1-201ENST00000550077 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
AC055716.1-201ENST00000550077 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 POTECB2RU33 542 aa12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 RFC4P35249 363 aa12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 IFNL2Q8IZJ0 200 aa12.15□□□□□ -0.46
AC055716.1-201ENST00000550077 RC3H1Q5TC82 1133 aaKnown RBP12.14□□□□□ -0.47
AC055716.1-201ENST00000550077 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
AC055716.1-201ENST00000550077 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
AC055716.1-201ENST00000550077 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
AC055716.1-201ENST00000550077 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
AC055716.1-201ENST00000550077 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
AC055716.1-201ENST00000550077 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
AC055716.1-201ENST00000550077 POLRMTO00411 1230 aaKnown RBP12.12□□□□□ -0.47
AC055716.1-201ENST00000550077 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
AC055716.1-201ENST00000550077 TM4SF1P30408 202 aa12.12□□□□□ -0.47
AC055716.1-201ENST00000550077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.47
AC055716.1-201ENST00000550077 ADRA2BP18089 450 aa12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 PCGF6Q9BYE7 350 aa12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
AC055716.1-201ENST00000550077 GLTPD2A6NH11 291 aa12.1□□□□□ -0.47
AC055716.1-201ENST00000550077 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
AC055716.1-201ENST00000550077 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
AC055716.1-201ENST00000550077 INTS5Q6P9B9 1019 aaKnown RBP12.1□□□□□ -0.47
AC055716.1-201ENST00000550077 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
AC055716.1-201ENST00000550077 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
AC055716.1-201ENST00000550077 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
AC055716.1-201ENST00000550077 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 NFKBIEO00221 500 aa12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 FOXN1O15353 648 aa12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
AC055716.1-201ENST00000550077 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 CARMIL3Q8ND23 1372 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms