RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CLSPNQ9HAW4 1339 aa21.23■□□□□ 0.99
RAB5C-205ENST00000550013 KDRP35968 1356 aa21.22■□□□□ 0.99
RAB5C-205ENST00000550013 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
RAB5C-205ENST00000550013 PANK3Q9H999 370 aa21.21■□□□□ 0.99
RAB5C-205ENST00000550013 CEP350Q5VT06 3117 aa21.2■□□□□ 0.98
RAB5C-205ENST00000550013 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
RAB5C-205ENST00000550013 PLEKHG2Q9H7P9 1386 aa21.2■□□□□ 0.98
RAB5C-205ENST00000550013 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
RAB5C-205ENST00000550013 ADCY9O60503 1353 aa21.19■□□□□ 0.98
RAB5C-205ENST00000550013 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
RAB5C-205ENST00000550013 COL5A3P25940 1745 aaPredicted RBP21.18■□□□□ 0.98
RAB5C-205ENST00000550013 MMP10P09238 476 aa21.18■□□□□ 0.98
RAB5C-205ENST00000550013 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
RAB5C-205ENST00000550013 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
RAB5C-205ENST00000550013 ERVV-2B6SEH9 535 aa21.17■□□□□ 0.98
RAB5C-205ENST00000550013 ZNF530Q6P9A1 599 aaPredicted RBP21.17■□□□□ 0.98
RAB5C-205ENST00000550013 KIF13BQ9NQT8 1826 aa21.16■□□□□ 0.98
RAB5C-205ENST00000550013 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
RAB5C-205ENST00000550013 PLEKHO1Q53GL0 409 aaPredicted RBP21.16■□□□□ 0.98
RAB5C-205ENST00000550013 AEBP1Q8IUX7 1158 aa21.16■□□□□ 0.98
RAB5C-205ENST00000550013 ZNF526Q8TF50 670 aaPredicted RBP21.16■□□□□ 0.98
RAB5C-205ENST00000550013 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
RAB5C-205ENST00000550013 MYH14Q7Z406 1995 aaKnown RBP21.16■□□□□ 0.98
RAB5C-205ENST00000550013 N4BP2Q86UW6 1770 aaPredicted RBP21.15■□□□□ 0.98
RAB5C-205ENST00000550013 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
RAB5C-205ENST00000550013 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
RAB5C-205ENST00000550013 GPBP1L1Q9HC44 474 aaPredicted RBP21.15■□□□□ 0.98
RAB5C-205ENST00000550013 RTCBQ9Y3I0 505 aaKnown RBP21.15■□□□□ 0.98
RAB5C-205ENST00000550013 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
RAB5C-205ENST00000550013 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
RAB5C-205ENST00000550013 MORC1Q86VD1 984 aa21.13■□□□□ 0.97
RAB5C-205ENST00000550013 C4AP0C0L4 1744 aa21.12■□□□□ 0.97
RAB5C-205ENST00000550013 CABP4P57796 275 aa21.12■□□□□ 0.97
RAB5C-205ENST00000550013 AMOTQ4VCS5 1084 aa21.12■□□□□ 0.97
RAB5C-205ENST00000550013 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
RAB5C-205ENST00000550013 ARHGEF1Q92888 912 aaKnown RBP21.12■□□□□ 0.97
RAB5C-205ENST00000550013 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
RAB5C-205ENST00000550013 MTHFSP49914 203 aa21.1■□□□□ 0.97
RAB5C-205ENST00000550013 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
RAB5C-205ENST00000550013 C10orf71Q711Q0 1435 aa21.1■□□□□ 0.97
RAB5C-205ENST00000550013 PTCD1O75127 700 aaKnown RBP21.09■□□□□ 0.97
RAB5C-205ENST00000550013 RPS6KA4O75676 772 aa21.09■□□□□ 0.97
RAB5C-205ENST00000550013 GYS1P13807 737 aa21.09■□□□□ 0.97
RAB5C-205ENST00000550013 ADRA2BP18089 450 aa21.09■□□□□ 0.97
RAB5C-205ENST00000550013 C1orf141Q5JVX7 400 aa21.09■□□□□ 0.97
RAB5C-205ENST00000550013 SULT6B1Q6IMI4 303 aa21.09■□□□□ 0.97
RAB5C-205ENST00000550013 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
RAB5C-205ENST00000550013 A0A0G2JLW4 131 aa21.08■□□□□ 0.97
RAB5C-205ENST00000550013 RFC4P35249 363 aa21.08■□□□□ 0.97
RAB5C-205ENST00000550013 TJP1Q07157 1748 aa21.08■□□□□ 0.97
RAB5C-205ENST00000550013 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
RAB5C-205ENST00000550013 IL13P35225 146 aa21.06■□□□□ 0.96
RAB5C-205ENST00000550013 TGFB2P61812 414 aa21.06■□□□□ 0.96
RAB5C-205ENST00000550013 BCS1LQ9Y276 419 aa21.06■□□□□ 0.96
RAB5C-205ENST00000550013 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
RAB5C-205ENST00000550013 BRCA1P38398 1863 aaKnown RBP21.06■□□□□ 0.96
RAB5C-205ENST00000550013 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
RAB5C-205ENST00000550013 CCDC87Q9NVE4 849 aa21.05■□□□□ 0.96
RAB5C-205ENST00000550013 DPEP1P16444 411 aa21.04■□□□□ 0.96
RAB5C-205ENST00000550013 SRP68Q9UHB9 627 aaKnown RBP21.04■□□□□ 0.96
RAB5C-205ENST00000550013 PARP3Q9Y6F1 533 aa21.04■□□□□ 0.96
RAB5C-205ENST00000550013 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
RAB5C-205ENST00000550013 KIF3CO14782 793 aa21.02■□□□□ 0.96
RAB5C-205ENST00000550013 HSPA6P17066 643 aa21.02■□□□□ 0.96
RAB5C-205ENST00000550013 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
RAB5C-205ENST00000550013 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
RAB5C-205ENST00000550013 ARHGAP27Q6ZUM4 889 aa21.01■□□□□ 0.95
RAB5C-205ENST00000550013 ADAMTS7Q9UKP4 1686 aa21■□□□□ 0.95
RAB5C-205ENST00000550013 FCHSD2O94868 740 aa21■□□□□ 0.95
RAB5C-205ENST00000550013 FKBP8Q14318 412 aa21■□□□□ 0.95
RAB5C-205ENST00000550013 USP42Q9H9J4 1324 aaKnown RBP21■□□□□ 0.95
RAB5C-205ENST00000550013 ARFGEF1Q9Y6D6 1849 aa20.99■□□□□ 0.95
RAB5C-205ENST00000550013 KCNA3P22001 575 aa20.99■□□□□ 0.95
RAB5C-205ENST00000550013 DDR1Q08345 913 aa20.99■□□□□ 0.95
RAB5C-205ENST00000550013 AKAP4Q5JQC9 854 aa20.99■□□□□ 0.95
RAB5C-205ENST00000550013 INTS5Q6P9B9 1019 aaKnown RBP20.99■□□□□ 0.95
RAB5C-205ENST00000550013 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
RAB5C-205ENST00000550013 DNAJC10Q8IXB1 793 aa20.98■□□□□ 0.95
RAB5C-205ENST00000550013 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
RAB5C-205ENST00000550013 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
RAB5C-205ENST00000550013 HMOX1P09601 288 aa20.97■□□□□ 0.95
RAB5C-205ENST00000550013 MRC1P22897 1456 aa20.96■□□□□ 0.95
RAB5C-205ENST00000550013 RNMTO43148 476 aaKnown RBP20.95■□□□□ 0.94
RAB5C-205ENST00000550013 SLC39A6Q13433 755 aa20.95■□□□□ 0.94
RAB5C-205ENST00000550013 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
RAB5C-205ENST00000550013 POLRMTO00411 1230 aaKnown RBP20.93■□□□□ 0.94
RAB5C-205ENST00000550013 PIM2Q9P1W9 311 aa20.93■□□□□ 0.94
RAB5C-205ENST00000550013 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
RAB5C-205ENST00000550013 CYP19A1P11511 503 aaPredicted RBP20.92■□□□□ 0.94
RAB5C-205ENST00000550013 TM4SF1P30408 202 aa20.92■□□□□ 0.94
RAB5C-205ENST00000550013 CHRNA5P30532 468 aa20.92■□□□□ 0.94
RAB5C-205ENST00000550013 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
RAB5C-205ENST00000550013 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
RAB5C-205ENST00000550013 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
RAB5C-205ENST00000550013 NMRK2Q9NPI5 230 aa20.92■□□□□ 0.94
RAB5C-205ENST00000550013 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
RAB5C-205ENST00000550013 ZPR1O75312 459 aa20.91■□□□□ 0.94
RAB5C-205ENST00000550013 DALRD3Q5D0E6 543 aaKnown RBP20.91■□□□□ 0.94
RAB5C-205ENST00000550013 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
RAB5C-205ENST00000550013 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms