RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SLC16A10Q8TF71 515 aa21.7■■□□□ 1.06
COX6A1-203ENST00000550009 SMARCC1Q92922 1105 aaPredicted RBP21.7■■□□□ 1.06
COX6A1-203ENST00000550009 YY1P25490 414 aa21.69■■□□□ 1.06
COX6A1-203ENST00000550009 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
COX6A1-203ENST00000550009 KDRP35968 1356 aa21.69■■□□□ 1.06
COX6A1-203ENST00000550009 COL3A1P02461 1466 aaPredicted RBP21.67■■□□□ 1.06
COX6A1-203ENST00000550009 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
COX6A1-203ENST00000550009 AK7Q96M32 723 aa21.66■■□□□ 1.06
COX6A1-203ENST00000550009 TJP1Q07157 1748 aa21.66■■□□□ 1.06
COX6A1-203ENST00000550009 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
COX6A1-203ENST00000550009 POLD1P28340 1107 aa21.65■■□□□ 1.06
COX6A1-203ENST00000550009 DCAF5Q96JK2 942 aa21.65■■□□□ 1.06
COX6A1-203ENST00000550009 C4AP0C0L4 1744 aa21.64■■□□□ 1.06
COX6A1-203ENST00000550009 ZNF831Q5JPB2 1677 aa21.64■■□□□ 1.05
COX6A1-203ENST00000550009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
COX6A1-203ENST00000550009 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
COX6A1-203ENST00000550009 LGR6Q9HBX8 967 aa21.64■■□□□ 1.05
COX6A1-203ENST00000550009 ERVV-2B6SEH9 535 aa21.63■■□□□ 1.05
COX6A1-203ENST00000550009 CABP4P57796 275 aa21.62■■□□□ 1.05
COX6A1-203ENST00000550009 AMOTQ4VCS5 1084 aa21.62■■□□□ 1.05
COX6A1-203ENST00000550009 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
COX6A1-203ENST00000550009 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
COX6A1-203ENST00000550009 GNPATO15228 680 aa21.61■■□□□ 1.05
COX6A1-203ENST00000550009 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
COX6A1-203ENST00000550009 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
COX6A1-203ENST00000550009 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
COX6A1-203ENST00000550009 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
COX6A1-203ENST00000550009 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
COX6A1-203ENST00000550009 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
COX6A1-203ENST00000550009 HSP90AB1P08238 724 aaKnown RBP21.59■■□□□ 1.05
COX6A1-203ENST00000550009 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
COX6A1-203ENST00000550009 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.05
COX6A1-203ENST00000550009 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
COX6A1-203ENST00000550009 N4BP2Q86UW6 1770 aaPredicted RBP21.57■■□□□ 1.04
COX6A1-203ENST00000550009 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
COX6A1-203ENST00000550009 SSFA2P28290 1259 aa21.56■■□□□ 1.04
COX6A1-203ENST00000550009 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
COX6A1-203ENST00000550009 GPR162Q16538 588 aa21.56■■□□□ 1.04
COX6A1-203ENST00000550009 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
COX6A1-203ENST00000550009 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
COX6A1-203ENST00000550009 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
COX6A1-203ENST00000550009 FLAD1Q8NFF5 587 aa21.55■■□□□ 1.04
COX6A1-203ENST00000550009 MRC1P22897 1456 aa21.54■■□□□ 1.04
COX6A1-203ENST00000550009 U2SURPO15042 1029 aaKnown RBP21.54■■□□□ 1.04
COX6A1-203ENST00000550009 RNMTO43148 476 aaKnown RBP21.54■■□□□ 1.04
COX6A1-203ENST00000550009 CICQ96RK0 1608 aaPredicted RBP21.54■■□□□ 1.04
COX6A1-203ENST00000550009 UBR2Q8IWV8 1755 aa21.53■■□□□ 1.04
COX6A1-203ENST00000550009 KIF13BQ9NQT8 1826 aa21.52■■□□□ 1.04
COX6A1-203ENST00000550009 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
COX6A1-203ENST00000550009 ARHGEF1Q92888 912 aaKnown RBP21.52■■□□□ 1.04
COX6A1-203ENST00000550009 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
COX6A1-203ENST00000550009 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
COX6A1-203ENST00000550009 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
COX6A1-203ENST00000550009 CNTNAP4Q9C0A0 1308 aa21.5■■□□□ 1.03
COX6A1-203ENST00000550009 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
COX6A1-203ENST00000550009 ZNF784Q8NCA9 323 aaPredicted RBP21.49■■□□□ 1.03
COX6A1-203ENST00000550009 PHACTR3Q96KR7 559 aa21.49■■□□□ 1.03
COX6A1-203ENST00000550009 SRP68Q9UHB9 627 aaKnown RBP21.49■■□□□ 1.03
COX6A1-203ENST00000550009 MMP10P09238 476 aa21.48■■□□□ 1.03
COX6A1-203ENST00000550009 PPP2R1AP30153 589 aa21.48■■□□□ 1.03
COX6A1-203ENST00000550009 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
COX6A1-203ENST00000550009 RC3H1Q5TC82 1133 aaKnown RBP21.48■■□□□ 1.03
COX6A1-203ENST00000550009 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
COX6A1-203ENST00000550009 RPS6KA4O75676 772 aa21.47■■□□□ 1.03
COX6A1-203ENST00000550009 INTS5Q6P9B9 1019 aaKnown RBP21.47■■□□□ 1.03
COX6A1-203ENST00000550009 BRCA1P38398 1863 aaKnown RBP21.46■■□□□ 1.03
COX6A1-203ENST00000550009 GYS1P13807 737 aa21.46■■□□□ 1.03
COX6A1-203ENST00000550009 IL17REQ8NFR9 667 aa21.46■■□□□ 1.03
COX6A1-203ENST00000550009 CD2APQ9Y5K6 639 aa21.46■■□□□ 1.03
COX6A1-203ENST00000550009 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
COX6A1-203ENST00000550009 AFDNP55196 1824 aaKnown RBP21.45■■□□□ 1.02
COX6A1-203ENST00000550009 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
COX6A1-203ENST00000550009 HMGB2P26583 209 aaKnown RBP21.42■■□□□ 1.02
COX6A1-203ENST00000550009 RFC4P35249 363 aa21.42■■□□□ 1.02
COX6A1-203ENST00000550009 KCNQ3O43525 872 aa21.41■■□□□ 1.02
COX6A1-203ENST00000550009 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
COX6A1-203ENST00000550009 FKBP8Q14318 412 aa21.41■■□□□ 1.02
COX6A1-203ENST00000550009 PXDNLA1KZ92 1463 aa21.4■■□□□ 1.02
COX6A1-203ENST00000550009 DDR1Q08345 913 aa21.39■■□□□ 1.01
COX6A1-203ENST00000550009 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
COX6A1-203ENST00000550009 USP42Q9H9J4 1324 aaKnown RBP21.38■■□□□ 1.01
COX6A1-203ENST00000550009 GNAT3A8MTJ3 354 aa21.38■■□□□ 1.01
COX6A1-203ENST00000550009 ADRA2BP18089 450 aa21.38■■□□□ 1.01
COX6A1-203ENST00000550009 CCDC87Q9NVE4 849 aa21.38■■□□□ 1.01
COX6A1-203ENST00000550009 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
COX6A1-203ENST00000550009 SOS1Q07889 1333 aaPredicted RBP21.37■■□□□ 1.01
COX6A1-203ENST00000550009 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
COX6A1-203ENST00000550009 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
COX6A1-203ENST00000550009 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
COX6A1-203ENST00000550009 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
COX6A1-203ENST00000550009 CFAP53Q96M91 514 aa21.37■■□□□ 1.01
COX6A1-203ENST00000550009 DCTN1Q14203 1278 aa21.36■■□□□ 1.01
COX6A1-203ENST00000550009 USPL1Q5W0Q7 1092 aa21.36■■□□□ 1.01
COX6A1-203ENST00000550009 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
COX6A1-203ENST00000550009 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
COX6A1-203ENST00000550009 CEMIPQ8WUJ3 1361 aa21.35■■□□□ 1.01
COX6A1-203ENST00000550009 MCM10Q7L590 875 aa21.34■■□□□ 1.01
COX6A1-203ENST00000550009 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
COX6A1-203ENST00000550009 DPEP1P16444 411 aa21.33■■□□□ 1.01
COX6A1-203ENST00000550009 CANXP27824 592 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms