RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 CDR1P51861 262 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
RPH3A-217ENST00000549913 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 DACH1Q9UI36 760 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
RPH3A-217ENST00000549913 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 FLIIQ13045 1269 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 SH2B1Q9NRF2 756 aaPredicted RBP13.26□□□□□ -0.29
RPH3A-217ENST00000549913 LRRFIP2Q9Y608 721 aaKnown RBP13.26□□□□□ -0.29
RPH3A-217ENST00000549913 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
RPH3A-217ENST00000549913 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
RPH3A-217ENST00000549913 CAMK4Q16566 473 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 NUCB1Q02818 461 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
RPH3A-217ENST00000549913 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 EPS15P42566 896 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
RPH3A-217ENST00000549913 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
RPH3A-217ENST00000549913 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
RPH3A-217ENST00000549913 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
RPH3A-217ENST00000549913 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 CDK5RAP3Q96JB5 506 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 MAGEC2Q9UBF1 373 aaPredicted RBP13.24□□□□□ -0.29
RPH3A-217ENST00000549913 PLCH2O75038 1416 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
RPH3A-217ENST00000549913 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
RPH3A-217ENST00000549913 MCM5P33992 734 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 NUP133Q8WUM0 1156 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
RPH3A-217ENST00000549913 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 IMMTQ16891 758 aaKnown RBP13.23□□□□□ -0.29
RPH3A-217ENST00000549913 TTC22Q5TAA0 569 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 TDO2P48775 406 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 LEKR1Q6ZMV7 388 aa13.23□□□□□ -0.29
RPH3A-217ENST00000549913 STARD3NLO95772 234 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
RPH3A-217ENST00000549913 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPH3A-217ENST00000549913 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 USP25Q9UHP3 1055 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
RPH3A-217ENST00000549913 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
RPH3A-217ENST00000549913 MYD88Q99836 296 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 PDCL3Q9H2J4 239 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
RPH3A-217ENST00000549913 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
RPH3A-217ENST00000549913 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
RPH3A-217ENST00000549913 FAM83GA6ND36 823 aa13.21□□□□□ -0.29
RPH3A-217ENST00000549913 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
RPH3A-217ENST00000549913 KIF2AO00139 706 aaPredicted RBP13.21□□□□□ -0.3
RPH3A-217ENST00000549913 FOXO3O43524 673 aa13.21□□□□□ -0.3
RPH3A-217ENST00000549913 TESK2Q96S53 571 aa13.21□□□□□ -0.3
RPH3A-217ENST00000549913 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
RPH3A-217ENST00000549913 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 CLCN1P35523 988 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
RPH3A-217ENST00000549913 SNX21Q969T3 373 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
RPH3A-217ENST00000549913 ERLIN1O75477 346 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 STIM1Q13586 685 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 WASF1Q92558 559 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
RPH3A-217ENST00000549913 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 ACEP12821 1306 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
RPH3A-217ENST00000549913 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
RPH3A-217ENST00000549913 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
RPH3A-217ENST00000549913 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
RPH3A-217ENST00000549913 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
RPH3A-217ENST00000549913 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
RPH3A-217ENST00000549913 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
RPH3A-217ENST00000549913 UBXN4Q92575 508 aa13.19□□□□□ -0.3
RPH3A-217ENST00000549913 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
RPH3A-217ENST00000549913 H0YHG0 523 aa13.18□□□□□ -0.3
RPH3A-217ENST00000549913 STX6O43752 255 aa13.18□□□□□ -0.3
RPH3A-217ENST00000549913 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPH3A-217ENST00000549913 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
RPH3A-217ENST00000549913 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
RPH3A-217ENST00000549913 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms