RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ATP10DQ9P241 1426 aa18.65■□□□□ 0.58
TROAP-211ENST00000549891 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
TROAP-211ENST00000549891 ITPK1Q13572 414 aa18.64■□□□□ 0.57
TROAP-211ENST00000549891 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
TROAP-211ENST00000549891 PLEKHO1Q53GL0 409 aaPredicted RBP18.63■□□□□ 0.57
TROAP-211ENST00000549891 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
TROAP-211ENST00000549891 DCAF5Q96JK2 942 aa18.63■□□□□ 0.57
TROAP-211ENST00000549891 GPBP1L1Q9HC44 474 aaPredicted RBP18.63■□□□□ 0.57
TROAP-211ENST00000549891 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
TROAP-211ENST00000549891 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
TROAP-211ENST00000549891 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
TROAP-211ENST00000549891 COL5A3P25940 1745 aaPredicted RBP18.62■□□□□ 0.57
TROAP-211ENST00000549891 KDRP35968 1356 aa18.61■□□□□ 0.57
TROAP-211ENST00000549891 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
TROAP-211ENST00000549891 PANK3Q9H999 370 aa18.61■□□□□ 0.57
TROAP-211ENST00000549891 ADCY9O60503 1353 aa18.6■□□□□ 0.57
TROAP-211ENST00000549891 MMP10P09238 476 aa18.6■□□□□ 0.57
TROAP-211ENST00000549891 ADRA2BP18089 450 aa18.6■□□□□ 0.57
TROAP-211ENST00000549891 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
TROAP-211ENST00000549891 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
TROAP-211ENST00000549891 RC3H1Q5TC82 1133 aaKnown RBP18.59■□□□□ 0.57
TROAP-211ENST00000549891 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
TROAP-211ENST00000549891 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
TROAP-211ENST00000549891 CABP4P57796 275 aa18.58■□□□□ 0.56
TROAP-211ENST00000549891 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
TROAP-211ENST00000549891 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
TROAP-211ENST00000549891 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
TROAP-211ENST00000549891 CNTNAP4Q9C0A0 1308 aa18.57■□□□□ 0.56
TROAP-211ENST00000549891 TGFB2P61812 414 aa18.57■□□□□ 0.56
TROAP-211ENST00000549891 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
TROAP-211ENST00000549891 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
TROAP-211ENST00000549891 RFC4P35249 363 aa18.56■□□□□ 0.56
TROAP-211ENST00000549891 MTHFSP49914 203 aa18.56■□□□□ 0.56
TROAP-211ENST00000549891 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
TROAP-211ENST00000549891 MYH14Q7Z406 1995 aaKnown RBP18.55■□□□□ 0.56
TROAP-211ENST00000549891 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
TROAP-211ENST00000549891 CEP350Q5VT06 3117 aa18.55■□□□□ 0.56
TROAP-211ENST00000549891 RPS6KA4O75676 772 aa18.55■□□□□ 0.56
TROAP-211ENST00000549891 ZNF526Q8TF50 670 aaPredicted RBP18.55■□□□□ 0.56
TROAP-211ENST00000549891 ARHGEF1Q92888 912 aaKnown RBP18.55■□□□□ 0.56
TROAP-211ENST00000549891 SLC4A9Q96Q91 983 aa18.55■□□□□ 0.56
TROAP-211ENST00000549891 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
TROAP-211ENST00000549891 PXDNLA1KZ92 1463 aa18.54■□□□□ 0.56
TROAP-211ENST00000549891 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
TROAP-211ENST00000549891 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
TROAP-211ENST00000549891 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
TROAP-211ENST00000549891 PARP3Q9Y6F1 533 aa18.53■□□□□ 0.56
TROAP-211ENST00000549891 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
TROAP-211ENST00000549891 GYS1P13807 737 aa18.52■□□□□ 0.56
TROAP-211ENST00000549891 BRCA1P38398 1863 aaKnown RBP18.52■□□□□ 0.55
TROAP-211ENST00000549891 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
TROAP-211ENST00000549891 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
TROAP-211ENST00000549891 AEBP1Q8IUX7 1158 aa18.51■□□□□ 0.55
TROAP-211ENST00000549891 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
TROAP-211ENST00000549891 BCS1LQ9Y276 419 aa18.51■□□□□ 0.55
TROAP-211ENST00000549891 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
TROAP-211ENST00000549891 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
TROAP-211ENST00000549891 A0A0G2JLW4 131 aa18.49■□□□□ 0.55
TROAP-211ENST00000549891 HSPA6P17066 643 aa18.49■□□□□ 0.55
TROAP-211ENST00000549891 TJP1Q07157 1748 aa18.49■□□□□ 0.55
TROAP-211ENST00000549891 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
TROAP-211ENST00000549891 IL13P35225 146 aa18.47■□□□□ 0.55
TROAP-211ENST00000549891 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
TROAP-211ENST00000549891 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
TROAP-211ENST00000549891 FCHSD2O94868 740 aa18.46■□□□□ 0.55
TROAP-211ENST00000549891 DPEP1P16444 411 aa18.46■□□□□ 0.55
TROAP-211ENST00000549891 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
TROAP-211ENST00000549891 USP42Q9H9J4 1324 aaKnown RBP18.46■□□□□ 0.55
TROAP-211ENST00000549891 KIF3CO14782 793 aa18.44■□□□□ 0.54
TROAP-211ENST00000549891 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
TROAP-211ENST00000549891 PIM2Q9P1W9 311 aa18.44■□□□□ 0.54
TROAP-211ENST00000549891 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
TROAP-211ENST00000549891 MRC1P22897 1456 aa18.42■□□□□ 0.54
TROAP-211ENST00000549891 ZPR1O75312 459 aa18.42■□□□□ 0.54
TROAP-211ENST00000549891 SRP68Q9UHB9 627 aaKnown RBP18.42■□□□□ 0.54
TROAP-211ENST00000549891 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
TROAP-211ENST00000549891 FKBP8Q14318 412 aa18.41■□□□□ 0.54
TROAP-211ENST00000549891 INTS5Q6P9B9 1019 aaKnown RBP18.41■□□□□ 0.54
TROAP-211ENST00000549891 TOMM70O94826 608 aa18.4■□□□□ 0.54
TROAP-211ENST00000549891 KCNA3P22001 575 aa18.4■□□□□ 0.54
TROAP-211ENST00000549891 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
TROAP-211ENST00000549891 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
TROAP-211ENST00000549891 DDR1Q08345 913 aa18.39■□□□□ 0.53
TROAP-211ENST00000549891 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
TROAP-211ENST00000549891 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
TROAP-211ENST00000549891 KIF7Q2M1P5 1343 aa18.39■□□□□ 0.53
TROAP-211ENST00000549891 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
TROAP-211ENST00000549891 HMOX1P09601 288 aa18.38■□□□□ 0.53
TROAP-211ENST00000549891 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
TROAP-211ENST00000549891 AFDNP55196 1824 aaKnown RBP18.37■□□□□ 0.53
TROAP-211ENST00000549891 SBF1O95248 1867 aa18.37■□□□□ 0.53
TROAP-211ENST00000549891 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
TROAP-211ENST00000549891 TM4SF1P30408 202 aa18.37■□□□□ 0.53
TROAP-211ENST00000549891 APLP1P51693 650 aa18.37■□□□□ 0.53
TROAP-211ENST00000549891 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
TROAP-211ENST00000549891 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
TROAP-211ENST00000549891 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
TROAP-211ENST00000549891 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
TROAP-211ENST00000549891 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
TROAP-211ENST00000549891 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 292.5 ms