RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CABP4P57796 275 aa13.17□□□□□ -0.3
HDAC7-229ENST00000549883 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
HDAC7-229ENST00000549883 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
HDAC7-229ENST00000549883 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
HDAC7-229ENST00000549883 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
HDAC7-229ENST00000549883 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
HDAC7-229ENST00000549883 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
HDAC7-229ENST00000549883 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
HDAC7-229ENST00000549883 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
HDAC7-229ENST00000549883 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
HDAC7-229ENST00000549883 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
HDAC7-229ENST00000549883 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
HDAC7-229ENST00000549883 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
HDAC7-229ENST00000549883 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
HDAC7-229ENST00000549883 PPP1R1BQ9UD71 204 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-229ENST00000549883 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-229ENST00000549883 U2AF1L5P0DN76 240 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-229ENST00000549883 U2AF1Q01081 240 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC7-229ENST00000549883 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
HDAC7-229ENST00000549883 TJP1Q07157 1748 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 MRC1P22897 1456 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
HDAC7-229ENST00000549883 PHF14O94880 888 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
HDAC7-229ENST00000549883 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-229ENST00000549883 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
HDAC7-229ENST00000549883 MSH5O43196 834 aa13.12□□□□□ -0.31
HDAC7-229ENST00000549883 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
HDAC7-229ENST00000549883 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
HDAC7-229ENST00000549883 AK7Q96M32 723 aa13.11□□□□□ -0.31
HDAC7-229ENST00000549883 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-229ENST00000549883 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
HDAC7-229ENST00000549883 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
HDAC7-229ENST00000549883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
HDAC7-229ENST00000549883 GNPATO15228 680 aa13.1□□□□□ -0.31
HDAC7-229ENST00000549883 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
HDAC7-229ENST00000549883 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
HDAC7-229ENST00000549883 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
HDAC7-229ENST00000549883 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
HDAC7-229ENST00000549883 ARXQ96QS3 562 aa13.09□□□□□ -0.31
HDAC7-229ENST00000549883 FCHSD2O94868 740 aa13.08□□□□□ -0.32
HDAC7-229ENST00000549883 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
HDAC7-229ENST00000549883 DCTN1Q14203 1278 aa13.08□□□□□ -0.32
HDAC7-229ENST00000549883 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
HDAC7-229ENST00000549883 SYT17Q9BSW7 474 aa13.08□□□□□ -0.32
HDAC7-229ENST00000549883 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
HDAC7-229ENST00000549883 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-229ENST00000549883 KCNQ3O43525 872 aa13.07□□□□□ -0.32
HDAC7-229ENST00000549883 RALBP1Q15311 655 aa13.07□□□□□ -0.32
HDAC7-229ENST00000549883 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
HDAC7-229ENST00000549883 CRKLP46109 303 aaKnown RBP13.06□□□□□ -0.32
HDAC7-229ENST00000549883 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
HDAC7-229ENST00000549883 MCM10Q7L590 875 aa13.06□□□□□ -0.32
HDAC7-229ENST00000549883 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
HDAC7-229ENST00000549883 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
HDAC7-229ENST00000549883 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
HDAC7-229ENST00000549883 SSFA2P28290 1259 aa13.05□□□□□ -0.32
HDAC7-229ENST00000549883 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
HDAC7-229ENST00000549883 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
HDAC7-229ENST00000549883 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
HDAC7-229ENST00000549883 POLD1P28340 1107 aa13.04□□□□□ -0.32
HDAC7-229ENST00000549883 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
HDAC7-229ENST00000549883 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
HDAC7-229ENST00000549883 ZNF496Q96IT1 587 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-229ENST00000549883 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
HDAC7-229ENST00000549883 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
HDAC7-229ENST00000549883 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-229ENST00000549883 TEFQ10587 303 aa13.03□□□□□ -0.32
HDAC7-229ENST00000549883 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-229ENST00000549883 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
HDAC7-229ENST00000549883 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
HDAC7-229ENST00000549883 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
HDAC7-229ENST00000549883 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
HDAC7-229ENST00000549883 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
HDAC7-229ENST00000549883 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
HDAC7-229ENST00000549883 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 GYS1P13807 737 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
HDAC7-229ENST00000549883 CCDC184Q52MB2 194 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
HDAC7-229ENST00000549883 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-229ENST00000549883 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-229ENST00000549883 MMP10P09238 476 aa12.99□□□□□ -0.33
HDAC7-229ENST00000549883 RFC4P35249 363 aa12.99□□□□□ -0.33
HDAC7-229ENST00000549883 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
HDAC7-229ENST00000549883 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
HDAC7-229ENST00000549883 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
HDAC7-229ENST00000549883 ADRA2BP18089 450 aa12.98□□□□□ -0.33
HDAC7-229ENST00000549883 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
HDAC7-229ENST00000549883 PIP4K2AP48426 406 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-229ENST00000549883 FKBP8Q14318 412 aa12.98□□□□□ -0.33
HDAC7-229ENST00000549883 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
HDAC7-229ENST00000549883 RRP7AQ9Y3A4 280 aaKnown RBP12.98□□□□□ -0.33
HDAC7-229ENST00000549883 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms