RNA–Protein interactions for RNA: ENST00000549754.1

KRT6A-204, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-204ENST00000549754 AK7Q96M32 723 aa13.57□□□□□ -0.24
KRT6A-204ENST00000549754 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
KRT6A-204ENST00000549754 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
KRT6A-204ENST00000549754 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
KRT6A-204ENST00000549754 CC2D1BQ5T0F9 858 aaKnown RBP13.56□□□□□ -0.24
KRT6A-204ENST00000549754 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
KRT6A-204ENST00000549754 PCNTO95613 3336 aa13.56□□□□□ -0.24
KRT6A-204ENST00000549754 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
KRT6A-204ENST00000549754 PHF14O94880 888 aa13.55□□□□□ -0.24
KRT6A-204ENST00000549754 SIK1P57059 783 aa13.55□□□□□ -0.24
KRT6A-204ENST00000549754 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
KRT6A-204ENST00000549754 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
KRT6A-204ENST00000549754 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
KRT6A-204ENST00000549754 KLRG1Q96E93 195 aa13.54□□□□□ -0.24
KRT6A-204ENST00000549754 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 MTHFSP49914 203 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 C1orf141Q5JVX7 400 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
KRT6A-204ENST00000549754 IL13P35225 146 aa13.52□□□□□ -0.25
KRT6A-204ENST00000549754 CABP4P57796 275 aa13.52□□□□□ -0.25
KRT6A-204ENST00000549754 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
KRT6A-204ENST00000549754 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
KRT6A-204ENST00000549754 ATG3Q9NT62 314 aa13.52□□□□□ -0.25
KRT6A-204ENST00000549754 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
KRT6A-204ENST00000549754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
KRT6A-204ENST00000549754 ERVV-2B6SEH9 535 aa13.51□□□□□ -0.25
KRT6A-204ENST00000549754 GNPATO15228 680 aa13.51□□□□□ -0.25
KRT6A-204ENST00000549754 ITPK1Q13572 414 aa13.51□□□□□ -0.25
KRT6A-204ENST00000549754 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
KRT6A-204ENST00000549754 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
KRT6A-204ENST00000549754 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
KRT6A-204ENST00000549754 HMOX1P09601 288 aa13.5□□□□□ -0.25
KRT6A-204ENST00000549754 NLGN2Q8NFZ4 835 aa13.5□□□□□ -0.25
KRT6A-204ENST00000549754 COL24A1Q17RW2 1714 aa13.49□□□□□ -0.25
KRT6A-204ENST00000549754 KDRP35968 1356 aa13.48□□□□□ -0.25
KRT6A-204ENST00000549754 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
KRT6A-204ENST00000549754 SSFA2P28290 1259 aa13.48□□□□□ -0.25
KRT6A-204ENST00000549754 HTRA3P83110 453 aa13.48□□□□□ -0.25
KRT6A-204ENST00000549754 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
KRT6A-204ENST00000549754 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
KRT6A-204ENST00000549754 KIF3CO14782 793 aa13.46□□□□□ -0.25
KRT6A-204ENST00000549754 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
KRT6A-204ENST00000549754 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
KRT6A-204ENST00000549754 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
KRT6A-204ENST00000549754 AKAP4Q5JQC9 854 aa13.45□□□□□ -0.26
KRT6A-204ENST00000549754 RTCBQ9Y3I0 505 aaKnown RBP13.45□□□□□ -0.26
KRT6A-204ENST00000549754 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
KRT6A-204ENST00000549754 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
KRT6A-204ENST00000549754 HSPA1AP0DMV8 641 aaKnown RBP13.43□□□□□ -0.26
KRT6A-204ENST00000549754 HSPA1BP0DMV9 641 aaKnown RBP13.43□□□□□ -0.26
KRT6A-204ENST00000549754 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
KRT6A-204ENST00000549754 LGR6Q9HBX8 967 aa13.43□□□□□ -0.26
KRT6A-204ENST00000549754 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
KRT6A-204ENST00000549754 YBX3P16989 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
KRT6A-204ENST00000549754 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
KRT6A-204ENST00000549754 CNTNAP4Q9C0A0 1308 aa13.41□□□□□ -0.26
KRT6A-204ENST00000549754 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
KRT6A-204ENST00000549754 MMP10P09238 476 aa13.41□□□□□ -0.26
KRT6A-204ENST00000549754 RFC4P35249 363 aa13.41□□□□□ -0.26
KRT6A-204ENST00000549754 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
KRT6A-204ENST00000549754 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
KRT6A-204ENST00000549754 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
KRT6A-204ENST00000549754 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
KRT6A-204ENST00000549754 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
KRT6A-204ENST00000549754 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
KRT6A-204ENST00000549754 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
KRT6A-204ENST00000549754 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
KRT6A-204ENST00000549754 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
KRT6A-204ENST00000549754 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
KRT6A-204ENST00000549754 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
KRT6A-204ENST00000549754 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
KRT6A-204ENST00000549754 ADRA2BP18089 450 aa13.39□□□□□ -0.27
KRT6A-204ENST00000549754 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
KRT6A-204ENST00000549754 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
KRT6A-204ENST00000549754 TJP1Q07157 1748 aa13.37□□□□□ -0.27
KRT6A-204ENST00000549754 TOMM70O94826 608 aa13.37□□□□□ -0.27
KRT6A-204ENST00000549754 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
KRT6A-204ENST00000549754 MRC1P22897 1456 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
KRT6A-204ENST00000549754 GYS1P13807 737 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
KRT6A-204ENST00000549754 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 PARP3Q9Y6F1 533 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
KRT6A-204ENST00000549754 ADCY9O60503 1353 aa13.35□□□□□ -0.27
KRT6A-204ENST00000549754 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
KRT6A-204ENST00000549754 GNAT3A8MTJ3 354 aa13.35□□□□□ -0.27
KRT6A-204ENST00000549754 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
KRT6A-204ENST00000549754 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
KRT6A-204ENST00000549754 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
KRT6A-204ENST00000549754 TEFQ10587 303 aa13.35□□□□□ -0.27
KRT6A-204ENST00000549754 CCDC87Q9NVE4 849 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms