RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 UBR3Q6ZT12 1888 aa14.13□□□□□ -0.15
CCDC38-207ENST00000549752 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
CCDC38-207ENST00000549752 PHKG2P15735 406 aa14.13□□□□□ -0.15
CCDC38-207ENST00000549752 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
CCDC38-207ENST00000549752 ZNF827Q17R98 1081 aa14.13□□□□□ -0.15
CCDC38-207ENST00000549752 CHD4Q14839 1912 aa14.13□□□□□ -0.15
CCDC38-207ENST00000549752 ABCB7O75027 752 aa14.12□□□□□ -0.15
CCDC38-207ENST00000549752 FLAD1Q8NFF5 587 aa14.12□□□□□ -0.15
CCDC38-207ENST00000549752 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
CCDC38-207ENST00000549752 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
CCDC38-207ENST00000549752 MTHFSP49914 203 aa14.11□□□□□ -0.15
CCDC38-207ENST00000549752 C1orf141Q5JVX7 400 aa14.11□□□□□ -0.15
CCDC38-207ENST00000549752 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
CCDC38-207ENST00000549752 KDRP35968 1356 aa14.1□□□□□ -0.15
CCDC38-207ENST00000549752 POLD1P28340 1107 aa14.1□□□□□ -0.15
CCDC38-207ENST00000549752 PTGER2P43116 358 aa14.1□□□□□ -0.15
CCDC38-207ENST00000549752 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
CCDC38-207ENST00000549752 ZNF530Q6P9A1 599 aaPredicted RBP14.1□□□□□ -0.15
CCDC38-207ENST00000549752 PIGBQ92521 554 aa14.1□□□□□ -0.15
CCDC38-207ENST00000549752 IL13P35225 146 aa14.09□□□□□ -0.15
CCDC38-207ENST00000549752 KCNQ4P56696 695 aa14.09□□□□□ -0.15
CCDC38-207ENST00000549752 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
CCDC38-207ENST00000549752 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
CCDC38-207ENST00000549752 ARXQ96QS3 562 aa14.08□□□□□ -0.16
CCDC38-207ENST00000549752 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-207ENST00000549752 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
CCDC38-207ENST00000549752 AK7Q96M32 723 aa14.07□□□□□ -0.16
CCDC38-207ENST00000549752 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
CCDC38-207ENST00000549752 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
CCDC38-207ENST00000549752 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
CCDC38-207ENST00000549752 SIK1P57059 783 aa14.06□□□□□ -0.16
CCDC38-207ENST00000549752 CABP4P57796 275 aa14.06□□□□□ -0.16
CCDC38-207ENST00000549752 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
CCDC38-207ENST00000549752 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
CCDC38-207ENST00000549752 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
CCDC38-207ENST00000549752 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-207ENST00000549752 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
CCDC38-207ENST00000549752 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
CCDC38-207ENST00000549752 SYT17Q9BSW7 474 aa14.04□□□□□ -0.16
CCDC38-207ENST00000549752 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
CCDC38-207ENST00000549752 COL23A1Q86Y22 540 aaPredicted RBP14.03□□□□□ -0.16
CCDC38-207ENST00000549752 ATG3Q9NT62 314 aa14.03□□□□□ -0.16
CCDC38-207ENST00000549752 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
CCDC38-207ENST00000549752 CICQ96RK0 1608 aaPredicted RBP14.03□□□□□ -0.16
CCDC38-207ENST00000549752 MYH14Q7Z406 1995 aaKnown RBP14.02□□□□□ -0.16
CCDC38-207ENST00000549752 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
CCDC38-207ENST00000549752 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
CCDC38-207ENST00000549752 SSFA2P28290 1259 aa14.02□□□□□ -0.17
CCDC38-207ENST00000549752 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
CCDC38-207ENST00000549752 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
CCDC38-207ENST00000549752 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
CCDC38-207ENST00000549752 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-207ENST00000549752 HMOX1P09601 288 aa14.01□□□□□ -0.17
CCDC38-207ENST00000549752 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-207ENST00000549752 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
CCDC38-207ENST00000549752 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
CCDC38-207ENST00000549752 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
CCDC38-207ENST00000549752 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
CCDC38-207ENST00000549752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
CCDC38-207ENST00000549752 GNPATO15228 680 aa13.99□□□□□ -0.17
CCDC38-207ENST00000549752 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
CCDC38-207ENST00000549752 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
CCDC38-207ENST00000549752 MRC1P22897 1456 aa13.99□□□□□ -0.17
CCDC38-207ENST00000549752 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
CCDC38-207ENST00000549752 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
CCDC38-207ENST00000549752 TJP1Q07157 1748 aa13.98□□□□□ -0.17
CCDC38-207ENST00000549752 PHF14O94880 888 aa13.98□□□□□ -0.17
CCDC38-207ENST00000549752 GAS2L2Q8NHY3 880 aa13.98□□□□□ -0.17
CCDC38-207ENST00000549752 RTCBQ9Y3I0 505 aaKnown RBP13.98□□□□□ -0.17
CCDC38-207ENST00000549752 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
CCDC38-207ENST00000549752 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
CCDC38-207ENST00000549752 YY1P25490 414 aa13.97□□□□□ -0.17
CCDC38-207ENST00000549752 ITPK1Q13572 414 aa13.97□□□□□ -0.17
CCDC38-207ENST00000549752 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
CCDC38-207ENST00000549752 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
CCDC38-207ENST00000549752 MTHFSDQ2M296 383 aaKnown RBP13.96□□□□□ -0.17
CCDC38-207ENST00000549752 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
CCDC38-207ENST00000549752 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
CCDC38-207ENST00000549752 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
CCDC38-207ENST00000549752 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
CCDC38-207ENST00000549752 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
CCDC38-207ENST00000549752 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
CCDC38-207ENST00000549752 DLG5Q8TDM6 1919 aa13.95□□□□□ -0.18
CCDC38-207ENST00000549752 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
CCDC38-207ENST00000549752 GPR162Q16538 588 aa13.94□□□□□ -0.18
CCDC38-207ENST00000549752 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
CCDC38-207ENST00000549752 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 NEFMP07197 916 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 DSG3P32926 999 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 RFC4P35249 363 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 TEFQ10587 303 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
CCDC38-207ENST00000549752 U2AF1L5P0DN76 240 aaPredicted RBP13.92□□□□□ -0.18
CCDC38-207ENST00000549752 U2AF1Q01081 240 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCDC38-207ENST00000549752 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
CCDC38-207ENST00000549752 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
CCDC38-207ENST00000549752 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
CCDC38-207ENST00000549752 FCHSD2O94868 740 aa13.91□□□□□ -0.18
CCDC38-207ENST00000549752 PRKAR2BP31323 418 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms