RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 HOXB7P09629 217 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 DCTN1Q14203 1278 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 ITGB4P16144 1822 aa9.24□□□□□ -0.93
CALCOCO1-215ENST00000549688 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 LGR6Q9HBX8 967 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 NHSQ6T4R5 1651 aa9.23□□□□□ -0.93
CALCOCO1-215ENST00000549688 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 CACNA1FO60840 1977 aa9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 UBR2Q8IWV8 1755 aa9.22□□□□□ -0.93
CALCOCO1-215ENST00000549688 BRWD3Q6RI45 1802 aa9.21□□□□□ -0.93
CALCOCO1-215ENST00000549688 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
CALCOCO1-215ENST00000549688 ZNF790Q6PG37 636 aa9.21□□□□□ -0.94
CALCOCO1-215ENST00000549688 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
CALCOCO1-215ENST00000549688 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 SBF2Q86WG5 1849 aa9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 TSR2Q969E8 191 aaKnown RBP9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 TEX13AQ9BXU3 409 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 RGS12O14924 1447 aa9.2□□□□□ -0.94
CALCOCO1-215ENST00000549688 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 TWISTNBQ3B726 338 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 RGS17Q9UGC6 210 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 RCAN3Q9UKA8 241 aa9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 CICQ96RK0 1608 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-215ENST00000549688 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 EIF4A1P60842 406 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 POTEAQ6S8J7 498 aa9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 KIF16BQ96L93 1317 aa9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 STK31Q9BXU1 1019 aa9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO1-215ENST00000549688 BTAF1O14981 1849 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 HEG1Q9ULI3 1381 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 MS4A1P11836 297 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 PIGBQ92521 554 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 RGPD3A6NKT7 1758 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 RGPD4Q7Z3J3 1758 aa9.17□□□□□ -0.94
CALCOCO1-215ENST00000549688 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
CALCOCO1-215ENST00000549688 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
CALCOCO1-215ENST00000549688 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-215ENST00000549688 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-215ENST00000549688 EP400Q96L91 3159 aa9.16□□□□□ -0.94
CALCOCO1-215ENST00000549688 PALLDQ8WX93 1383 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 LY75O60449 1722 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 VAMP4O75379 141 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 STARD3NLO95772 234 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 CANXP27824 592 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 ATG3Q9NT62 314 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-215ENST00000549688 NEFLP07196 543 aa9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 RARSP54136 660 aaKnown RBP9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 SLC39A6Q13433 755 aa9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
CALCOCO1-215ENST00000549688 C5P01031 1676 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 PTPRCP08575 1304 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 PTCD1O75127 700 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 SIK1P57059 783 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
CALCOCO1-215ENST00000549688 COL5A3P25940 1745 aaPredicted RBP9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 TJP1Q07157 1748 aa9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 ELL2O00472 640 aaPredicted RBP9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 PLSCR1O15162 318 aa9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 KCNQ2O43526 872 aa9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 DDX58O95786 925 aaKnown RBP9.12□□□□□ -0.95
CALCOCO1-215ENST00000549688 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms