RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 AMIGO3Q86WK7 504 aa21.46■■□□□ 1.03
CDK4-206ENST00000549606 DCAF5Q96JK2 942 aa21.46■■□□□ 1.03
CDK4-206ENST00000549606 ERVV-2B6SEH9 535 aa21.45■■□□□ 1.02
CDK4-206ENST00000549606 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
CDK4-206ENST00000549606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.44■■□□□ 1.02
CDK4-206ENST00000549606 ITPK1Q13572 414 aa21.44■■□□□ 1.02
CDK4-206ENST00000549606 IL13P35225 146 aa21.43■■□□□ 1.02
CDK4-206ENST00000549606 C1orf141Q5JVX7 400 aa21.43■■□□□ 1.02
CDK4-206ENST00000549606 GOLGB1Q14789 3259 aaKnown RBP21.43■■□□□ 1.02
CDK4-206ENST00000549606 GNPATO15228 680 aa21.42■■□□□ 1.02
CDK4-206ENST00000549606 MTHFSP49914 203 aa21.42■■□□□ 1.02
CDK4-206ENST00000549606 CABP4P57796 275 aa21.42■■□□□ 1.02
CDK4-206ENST00000549606 CC2D1BQ5T0F9 858 aaKnown RBP21.42■■□□□ 1.02
CDK4-206ENST00000549606 RBM42Q9BTD8 480 aaKnown RBP21.42■■□□□ 1.02
CDK4-206ENST00000549606 KDM6AO15550 1401 aaPredicted RBP21.41■■□□□ 1.02
CDK4-206ENST00000549606 SSFA2P28290 1259 aa21.41■■□□□ 1.02
CDK4-206ENST00000549606 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
CDK4-206ENST00000549606 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
CDK4-206ENST00000549606 ZNF784Q8NCA9 323 aaPredicted RBP21.39■■□□□ 1.01
CDK4-206ENST00000549606 KDRP35968 1356 aa21.38■■□□□ 1.01
CDK4-206ENST00000549606 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
CDK4-206ENST00000549606 SLC4A9Q96Q91 983 aa21.37■■□□□ 1.01
CDK4-206ENST00000549606 CD2APQ9Y5K6 639 aa21.37■■□□□ 1.01
CDK4-206ENST00000549606 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
CDK4-206ENST00000549606 HMOX1P09601 288 aa21.36■■□□□ 1.01
CDK4-206ENST00000549606 COL5A3P25940 1745 aaPredicted RBP21.35■■□□□ 1.01
CDK4-206ENST00000549606 YBX3P16989 372 aaKnown RBP eCLIP21.35■■□□□ 1.012e-7■□□□□ 9.7
CDK4-206ENST00000549606 RTCBQ9Y3I0 505 aaKnown RBP21.35■■□□□ 1.01
CDK4-206ENST00000549606 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
CDK4-206ENST00000549606 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
CDK4-206ENST00000549606 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
CDK4-206ENST00000549606 GRIN3BO60391 1043 aa21.33■■□□□ 1.01
CDK4-206ENST00000549606 DIAPH1O60610 1272 aaKnown RBP21.33■■□□□ 1.01
CDK4-206ENST00000549606 AKAP4Q5JQC9 854 aa21.33■■□□□ 1.01
CDK4-206ENST00000549606 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
CDK4-206ENST00000549606 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
CDK4-206ENST00000549606 LGR6Q9HBX8 967 aa21.3■■□□□ 1
CDK4-206ENST00000549606 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
CDK4-206ENST00000549606 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
CDK4-206ENST00000549606 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
CDK4-206ENST00000549606 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
CDK4-206ENST00000549606 RPS6KA4O75676 772 aa21.28■■□□□ 1
CDK4-206ENST00000549606 MMP10P09238 476 aa21.28■■□□□ 1
CDK4-206ENST00000549606 RFC4P35249 363 aa21.28■■□□□ 1
CDK4-206ENST00000549606 NPC1L1Q9UHC9 1359 aa21.27■■□□□ 1
CDK4-206ENST00000549606 ADRA2BP18089 450 aa21.27■■□□□ 1
CDK4-206ENST00000549606 MTHFSDQ2M296 383 aaKnown RBP21.27■■□□□ 1
CDK4-206ENST00000549606 SLC52A2Q9HAB3 445 aa21.27■■□□□ 1
CDK4-206ENST00000549606 TJP1Q07157 1748 aa21.26■□□□□ 0.99
CDK4-206ENST00000549606 U2SURPO15042 1029 aaKnown RBP21.26■□□□□ 0.99
CDK4-206ENST00000549606 RNMTO43148 476 aaKnown RBP21.26■□□□□ 0.99
CDK4-206ENST00000549606 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
CDK4-206ENST00000549606 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
CDK4-206ENST00000549606 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
CDK4-206ENST00000549606 GYS1P13807 737 aa21.24■□□□□ 0.99
CDK4-206ENST00000549606 CICQ96RK0 1608 aaPredicted RBP21.23■□□□□ 0.99
CDK4-206ENST00000549606 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
CDK4-206ENST00000549606 COL3A1P02461 1466 aaPredicted RBP21.23■□□□□ 0.99
CDK4-206ENST00000549606 MRC1P22897 1456 aa21.21■□□□□ 0.99
CDK4-206ENST00000549606 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
CDK4-206ENST00000549606 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.99
CDK4-206ENST00000549606 KIF13BQ9NQT8 1826 aa21.2■□□□□ 0.98
CDK4-206ENST00000549606 SRP68Q9UHB9 627 aaKnown RBP21.2■□□□□ 0.98
CDK4-206ENST00000549606 PARP3Q9Y6F1 533 aa21.2■□□□□ 0.98
CDK4-206ENST00000549606 ADAMTS7Q9UKP4 1686 aa21.2■□□□□ 0.98
CDK4-206ENST00000549606 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
CDK4-206ENST00000549606 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
CDK4-206ENST00000549606 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
CDK4-206ENST00000549606 TGFB2P61812 414 aa21.17■□□□□ 0.98
CDK4-206ENST00000549606 KCPQ6ZWJ8 1503 aa21.17■□□□□ 0.98
CDK4-206ENST00000549606 KIAA1551Q9HCM1 1747 aa21.17■□□□□ 0.98
CDK4-206ENST00000549606 PXDNLA1KZ92 1463 aa21.16■□□□□ 0.98
CDK4-206ENST00000549606 USP42Q9H9J4 1324 aaKnown RBP21.16■□□□□ 0.98
CDK4-206ENST00000549606 A0A0G2JLW4 131 aa21.16■□□□□ 0.98
CDK4-206ENST00000549606 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
CDK4-206ENST00000549606 C1QTNF8P60827 252 aa21.16■□□□□ 0.98
CDK4-206ENST00000549606 FKBP8Q14318 412 aa21.16■□□□□ 0.98
CDK4-206ENST00000549606 C10orf71Q711Q0 1435 aa21.15■□□□□ 0.98
CDK4-206ENST00000549606 GNAT3A8MTJ3 354 aa21.15■□□□□ 0.98
CDK4-206ENST00000549606 CYP19A1P11511 503 aaPredicted RBP21.15■□□□□ 0.98
CDK4-206ENST00000549606 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
CDK4-206ENST00000549606 ATP10DQ9P241 1426 aa21.14■□□□□ 0.98
CDK4-206ENST00000549606 ZPR1O75312 459 aa21.14■□□□□ 0.97
CDK4-206ENST00000549606 TEFQ10587 303 aa21.14■□□□□ 0.97
CDK4-206ENST00000549606 TTC5Q8N0Z6 440 aa21.14■□□□□ 0.97
CDK4-206ENST00000549606 UBR2Q8IWV8 1755 aa21.14■□□□□ 0.97
CDK4-206ENST00000549606 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
CDK4-206ENST00000549606 BCS1LQ9Y276 419 aa21.13■□□□□ 0.97
CDK4-206ENST00000549606 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
CDK4-206ENST00000549606 DPEP1P16444 411 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 PPP2R1AP30153 589 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 PRKAR2BP31323 418 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 USPL1Q5W0Q7 1092 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 NUDCQ9Y266 331 aa21.12■□□□□ 0.97
CDK4-206ENST00000549606 DDR1Q08345 913 aa21.11■□□□□ 0.97
CDK4-206ENST00000549606 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
CDK4-206ENST00000549606 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
CDK4-206ENST00000549606 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
CDK4-206ENST00000549606 ZNF526Q8TF50 670 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms