RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
USP15-215ENST00000549523 TESK2Q96S53 571 aa16.5■□□□□ 0.23
USP15-215ENST00000549523 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
USP15-215ENST00000549523 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
USP15-215ENST00000549523 GNPATO15228 680 aa16.49■□□□□ 0.23
USP15-215ENST00000549523 BRCA1P38398 1863 aaKnown RBP16.49■□□□□ 0.23
USP15-215ENST00000549523 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
USP15-215ENST00000549523 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
USP15-215ENST00000549523 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
USP15-215ENST00000549523 KCPQ6ZWJ8 1503 aa16.49■□□□□ 0.23
USP15-215ENST00000549523 FYB1O15117 783 aa16.48■□□□□ 0.23
USP15-215ENST00000549523 DPEP1P16444 411 aa16.48■□□□□ 0.23
USP15-215ENST00000549523 KCNA3P22001 575 aa16.48■□□□□ 0.23
USP15-215ENST00000549523 KDRP35968 1356 aa16.48■□□□□ 0.23
USP15-215ENST00000549523 KDM2BQ8NHM5 1336 aa16.47■□□□□ 0.23
USP15-215ENST00000549523 C9orf131Q5VYM1 1079 aa16.47■□□□□ 0.23
USP15-215ENST00000549523 SMC1BQ8NDV3 1235 aa16.47■□□□□ 0.23
USP15-215ENST00000549523 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
USP15-215ENST00000549523 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
USP15-215ENST00000549523 FLT4P35916 1363 aa16.46■□□□□ 0.23
USP15-215ENST00000549523 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
USP15-215ENST00000549523 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
USP15-215ENST00000549523 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
USP15-215ENST00000549523 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
USP15-215ENST00000549523 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
USP15-215ENST00000549523 FCHSD2O94868 740 aa16.43■□□□□ 0.22
USP15-215ENST00000549523 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
USP15-215ENST00000549523 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
USP15-215ENST00000549523 RRAGCQ9HB90 399 aa16.43■□□□□ 0.22
USP15-215ENST00000549523 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
USP15-215ENST00000549523 GYS1P13807 737 aa16.42■□□□□ 0.22
USP15-215ENST00000549523 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
USP15-215ENST00000549523 TMF1P82094 1093 aa16.41■□□□□ 0.22
USP15-215ENST00000549523 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
USP15-215ENST00000549523 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
USP15-215ENST00000549523 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
USP15-215ENST00000549523 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
USP15-215ENST00000549523 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
USP15-215ENST00000549523 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
USP15-215ENST00000549523 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
USP15-215ENST00000549523 SBF1O95248 1867 aa16.39■□□□□ 0.21
USP15-215ENST00000549523 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
USP15-215ENST00000549523 PHKG2P15735 406 aa16.38■□□□□ 0.21
USP15-215ENST00000549523 ADRA2BP18089 450 aa16.38■□□□□ 0.21
USP15-215ENST00000549523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.211e-8■■■■□ 20.9
USP15-215ENST00000549523 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
USP15-215ENST00000549523 RTCBQ9Y3I0 505 aaKnown RBP16.38■□□□□ 0.21
USP15-215ENST00000549523 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
USP15-215ENST00000549523 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
USP15-215ENST00000549523 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
USP15-215ENST00000549523 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
USP15-215ENST00000549523 ANKRD26Q9UPS8 1709 aa16.36■□□□□ 0.21
USP15-215ENST00000549523 DDR1Q08345 913 aa16.36■□□□□ 0.21
USP15-215ENST00000549523 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
USP15-215ENST00000549523 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
USP15-215ENST00000549523 DALRD3Q5D0E6 543 aaKnown RBP16.35■□□□□ 0.21
USP15-215ENST00000549523 EYA1Q99502 592 aa16.35■□□□□ 0.21
USP15-215ENST00000549523 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
USP15-215ENST00000549523 CHRNA5P30532 468 aa16.34■□□□□ 0.21
USP15-215ENST00000549523 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
USP15-215ENST00000549523 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
USP15-215ENST00000549523 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.21
USP15-215ENST00000549523 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.21
USP15-215ENST00000549523 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
USP15-215ENST00000549523 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
USP15-215ENST00000549523 RFC4P35249 363 aa16.32■□□□□ 0.2
USP15-215ENST00000549523 RASSF7Q02833 373 aa16.32■□□□□ 0.2
USP15-215ENST00000549523 FKBP8Q14318 412 aa16.32■□□□□ 0.2
USP15-215ENST00000549523 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
USP15-215ENST00000549523 CARD14Q9BXL6 1004 aa16.32■□□□□ 0.2
USP15-215ENST00000549523 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
USP15-215ENST00000549523 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
USP15-215ENST00000549523 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
USP15-215ENST00000549523 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
USP15-215ENST00000549523 FOXN1O15353 648 aa16.31■□□□□ 0.2
USP15-215ENST00000549523 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
USP15-215ENST00000549523 POTECB2RU33 542 aa16.29■□□□□ 0.2
USP15-215ENST00000549523 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
USP15-215ENST00000549523 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
USP15-215ENST00000549523 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
USP15-215ENST00000549523 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
USP15-215ENST00000549523 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
USP15-215ENST00000549523 TM4SF1P30408 202 aa16.27■□□□□ 0.2
USP15-215ENST00000549523 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
USP15-215ENST00000549523 TIAM2Q8IVF5 1701 aa16.26■□□□□ 0.19
USP15-215ENST00000549523 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
USP15-215ENST00000549523 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
USP15-215ENST00000549523 TJP1Q07157 1748 aa16.25■□□□□ 0.19
USP15-215ENST00000549523 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
USP15-215ENST00000549523 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
USP15-215ENST00000549523 LMNB1P20700 586 aa16.25■□□□□ 0.19
USP15-215ENST00000549523 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
USP15-215ENST00000549523 NFKBIEO00221 500 aa16.24■□□□□ 0.19
USP15-215ENST00000549523 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
USP15-215ENST00000549523 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
USP15-215ENST00000549523 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
USP15-215ENST00000549523 ABHD8Q96I13 439 aa16.24■□□□□ 0.19
USP15-215ENST00000549523 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
USP15-215ENST00000549523 CNTNAP1P78357 1384 aa16.23■□□□□ 0.19
USP15-215ENST00000549523 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms