RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
PRDM4-204ENST00000549416 ESYT1Q9BSJ8 1104 aa8.86□□□□□ -0.99
PRDM4-204ENST00000549416 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
PRDM4-204ENST00000549416 MEN1O00255 615 aa8.85□□□□□ -0.99
PRDM4-204ENST00000549416 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
PRDM4-204ENST00000549416 SCARF1Q14162 830 aa8.85□□□□□ -0.99
PRDM4-204ENST00000549416 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
PRDM4-204ENST00000549416 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
PRDM4-204ENST00000549416 SERTAD1Q9UHV2 236 aa8.85□□□□□ -0.99
PRDM4-204ENST00000549416 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
PRDM4-204ENST00000549416 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
PRDM4-204ENST00000549416 SEC13P55735 322 aa8.83□□□□□ -1
PRDM4-204ENST00000549416 CENPCQ03188 943 aa8.83□□□□□ -1
PRDM4-204ENST00000549416 FHDC1Q9C0D6 1143 aaPredicted RBP8.83□□□□□ -1
PRDM4-204ENST00000549416 POLMQ9NP87 494 aaPredicted RBP8.83□□□□□ -1
PRDM4-204ENST00000549416 GMPR2Q9P2T1 348 aaKnown RBP8.83□□□□□ -1
PRDM4-204ENST00000549416 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
PRDM4-204ENST00000549416 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
PRDM4-204ENST00000549416 M0R2N6 131 aa8.82□□□□□ -1
PRDM4-204ENST00000549416 RNF144AP50876 292 aaPredicted RBP8.82□□□□□ -1
PRDM4-204ENST00000549416 EPHA4P54764 986 aa8.82□□□□□ -1
PRDM4-204ENST00000549416 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
PRDM4-204ENST00000549416 FAM200AQ8TCP9 573 aa8.82□□□□□ -1
PRDM4-204ENST00000549416 NLRP3Q96P20 1036 aa8.82□□□□□ -1
PRDM4-204ENST00000549416 TTLL8A6PVC2 850 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 GPC1P35052 558 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 SMTNP53814 917 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 FAM69CQ0P6D2 419 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
PRDM4-204ENST00000549416 RNF217Q8TC41 542 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 GRIP2Q9C0E4 1043 aa8.81□□□□□ -1
PRDM4-204ENST00000549416 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
PRDM4-204ENST00000549416 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 POTECB2RU33 542 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 BACH1O14867 736 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 MTFR1Q15390 333 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 TLR1Q15399 786 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 TNS4Q8IZW8 715 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 RETREG2Q8NC44 543 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 USP3Q9Y6I4 520 aa8.8□□□□□ -1
PRDM4-204ENST00000549416 CARNS1A5YM72 827 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 A6NJY4 79 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 FIGNL2A6NMB9 653 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 LGR5O75473 907 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 TRIM47Q96LD4 638 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 SLAIN2Q9P270 581 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 DNMT3LQ9UJW3 386 aa8.79□□□□□ -1
PRDM4-204ENST00000549416 SOBPA7XYQ1 873 aa8.78□□□□□ -1
PRDM4-204ENST00000549416 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
PRDM4-204ENST00000549416 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
PRDM4-204ENST00000549416 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
PRDM4-204ENST00000549416 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
PRDM4-204ENST00000549416 FOXK2Q01167 660 aa8.77□□□□□ -1.01
PRDM4-204ENST00000549416 SLC27A3Q5K4L6 730 aa8.77□□□□□ -1.01
PRDM4-204ENST00000549416 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
PRDM4-204ENST00000549416 SCHIP1Q9P0W5 487 aaPredicted RBP8.77□□□□□ -1.01
PRDM4-204ENST00000549416 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
PRDM4-204ENST00000549416 PRICKLE2Q7Z3G6 844 aa8.76□□□□□ -1.01
PRDM4-204ENST00000549416 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
PRDM4-204ENST00000549416 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
PRDM4-204ENST00000549416 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
PRDM4-204ENST00000549416 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
PRDM4-204ENST00000549416 TSPAN10Q9H1Z9 355 aaPredicted RBP8.76□□□□□ -1.01
PRDM4-204ENST00000549416 SPATA31C2B4DYI2 1134 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 C21orf2O43822 256 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 POU4F2Q12837 409 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
PRDM4-204ENST00000549416 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
PRDM4-204ENST00000549416 USTQ9Y2C2 406 aa8.74□□□□□ -1.01
PRDM4-204ENST00000549416 C11orf95C9JLR9 678 aaPredicted RBP8.73□□□□□ -1.01
PRDM4-204ENST00000549416 MAN1A2O60476 641 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 RHOQP17081 205 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 WEE1P30291 646 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 C4orf17Q53FE4 359 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 TMEM214Q6NUQ4 689 aaKnown RBP8.73□□□□□ -1.01
PRDM4-204ENST00000549416 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
PRDM4-204ENST00000549416 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
PRDM4-204ENST00000549416 OCLNQ16625 522 aa8.72□□□□□ -1.01
PRDM4-204ENST00000549416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.72□□□□□ -1.01
PRDM4-204ENST00000549416 ZDHHC1Q8WTX9 485 aa8.72□□□□□ -1.01
PRDM4-204ENST00000549416 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
PRDM4-204ENST00000549416 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
PRDM4-204ENST00000549416 PRMT3O60678 531 aa8.71□□□□□ -1.02
PRDM4-204ENST00000549416 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
PRDM4-204ENST00000549416 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
PRDM4-204ENST00000549416 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
PRDM4-204ENST00000549416 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
PRDM4-204ENST00000549416 IGFBP4P22692 258 aa8.7□□□□□ -1.02
PRDM4-204ENST00000549416 PHKA2P46019 1235 aa8.7□□□□□ -1.02
PRDM4-204ENST00000549416 GNASQ5JWF2 1037 aa8.7□□□□□ -1.02
PRDM4-204ENST00000549416 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
PRDM4-204ENST00000549416 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
PRDM4-204ENST00000549416 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
PRDM4-204ENST00000549416 NOS2P35228 1153 aa8.69□□□□□ -1.02
PRDM4-204ENST00000549416 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
PRDM4-204ENST00000549416 TEAD4Q15561 434 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms