RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
LINC00661-204ENST00000549354 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 DDX19BQ9UMR2 479 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
LINC00661-204ENST00000549354 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
LINC00661-204ENST00000549354 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 COL18A1P39060 1754 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 GNAT3A8MTJ3 354 aa13.79□□□□□ -0.2
LINC00661-204ENST00000549354 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
LINC00661-204ENST00000549354 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
LINC00661-204ENST00000549354 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.2
LINC00661-204ENST00000549354 ABCC4O15439 1325 aa13.77□□□□□ -0.2
LINC00661-204ENST00000549354 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
LINC00661-204ENST00000549354 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
LINC00661-204ENST00000549354 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
LINC00661-204ENST00000549354 ZBTB40Q9NUA8 1239 aa13.77□□□□□ -0.21
LINC00661-204ENST00000549354 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
LINC00661-204ENST00000549354 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
LINC00661-204ENST00000549354 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
LINC00661-204ENST00000549354 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
LINC00661-204ENST00000549354 HDAC1Q13547 482 aaPredicted RBP13.75□□□□□ -0.21
LINC00661-204ENST00000549354 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 CPDO75976 1380 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 BRINP3Q76B58 766 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
LINC00661-204ENST00000549354 API5Q9BZZ5 524 aaKnown RBP13.74□□□□□ -0.21
LINC00661-204ENST00000549354 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
LINC00661-204ENST00000549354 RGS12O14924 1447 aa13.73□□□□□ -0.21
LINC00661-204ENST00000549354 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
LINC00661-204ENST00000549354 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
LINC00661-204ENST00000549354 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
LINC00661-204ENST00000549354 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
LINC00661-204ENST00000549354 F6X3S4 739 aa13.73□□□□□ -0.21
LINC00661-204ENST00000549354 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
LINC00661-204ENST00000549354 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
LINC00661-204ENST00000549354 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
LINC00661-204ENST00000549354 TSPYL4Q9UJ04 414 aa13.72□□□□□ -0.21
LINC00661-204ENST00000549354 ERBB3P21860 1342 aa13.72□□□□□ -0.21
LINC00661-204ENST00000549354 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
LINC00661-204ENST00000549354 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
LINC00661-204ENST00000549354 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
LINC00661-204ENST00000549354 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
LINC00661-204ENST00000549354 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
LINC00661-204ENST00000549354 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
LINC00661-204ENST00000549354 PTPRCP08575 1304 aa13.72□□□□□ -0.21
LINC00661-204ENST00000549354 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
LINC00661-204ENST00000549354 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
LINC00661-204ENST00000549354 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
LINC00661-204ENST00000549354 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
LINC00661-204ENST00000549354 LMOD2Q6P5Q4 547 aa13.71□□□□□ -0.21
LINC00661-204ENST00000549354 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.21
LINC00661-204ENST00000549354 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
LINC00661-204ENST00000549354 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
LINC00661-204ENST00000549354 SSFA2P28290 1259 aa13.7□□□□□ -0.22
LINC00661-204ENST00000549354 NHSL1Q5SYE7 1610 aa13.69□□□□□ -0.22
LINC00661-204ENST00000549354 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
LINC00661-204ENST00000549354 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
LINC00661-204ENST00000549354 FSD2A1L4K1 749 aa13.69□□□□□ -0.22
LINC00661-204ENST00000549354 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
LINC00661-204ENST00000549354 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
LINC00661-204ENST00000549354 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
LINC00661-204ENST00000549354 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
LINC00661-204ENST00000549354 MRE11P49959 708 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
LINC00661-204ENST00000549354 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
LINC00661-204ENST00000549354 PKP1Q13835 747 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00661-204ENST00000549354 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 NUCB1Q02818 461 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
LINC00661-204ENST00000549354 ABCA3Q99758 1704 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 HOXB7P09629 217 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
LINC00661-204ENST00000549354 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
LINC00661-204ENST00000549354 EXOC6BQ9Y2D4 811 aa13.66□□□□□ -0.22
LINC00661-204ENST00000549354 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
LINC00661-204ENST00000549354 N4BP2Q86UW6 1770 aaPredicted RBP13.65□□□□□ -0.22
LINC00661-204ENST00000549354 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
LINC00661-204ENST00000549354 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 ESPNB1AK53 854 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.22
LINC00661-204ENST00000549354 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
LINC00661-204ENST00000549354 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
LINC00661-204ENST00000549354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
LINC00661-204ENST00000549354 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
LINC00661-204ENST00000549354 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms