RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	USP6	P35125	1406 aa		13.79	□□□□□ -0.2
ARL1-206	ENST00000549302	TXNRD1	Q16881	649 aa		13.78	□□□□□ -0.2
ARL1-206	ENST00000549302	AXIN2	Q9Y2T1	843 aa		13.78	□□□□□ -0.2
ARL1-206	ENST00000549302	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	SLC15A2	Q16348	729 aa		13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	VARS2	Q5ST30	1063 aa	Known RBP	13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	PTF1A	Q7RTS3	328 aa		13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	ARHGEF25	Q86VW2	580 aa		13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	EMILIN3	Q9NT22	766 aa		13.77	□□□□□ -0.21
ARL1-206	ENST00000549302	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.76	□□□□□ -0.21
ARL1-206	ENST00000549302	WDR70	Q9NW82	654 aa		13.76	□□□□□ -0.21
ARL1-206	ENST00000549302	TTC21B	Q7Z4L5	1316 aa		13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	CAMK2B	Q13554	666 aa		13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	MTFR1L	Q9H019	292 aa		13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	LHX6	Q9UPM6	363 aa		13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	LMO7	Q8WWI1	1683 aa		13.75	□□□□□ -0.21
ARL1-206	ENST00000549302	BCL9	O00512	1426 aa		13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	CCDC7	Q96M83	1385 aa		13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	TTC21A	Q8NDW8	1320 aa		13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	PTGER2	P43116	358 aa		13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	SYT17	Q9BSW7	474 aa		13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.74	□□□□□ -0.21
ARL1-206	ENST00000549302	CPSF1	Q10570	1443 aa	Known RBP	13.73	□□□□□ -0.21
ARL1-206	ENST00000549302	NUP188	Q5SRE5	1749 aa		13.73	□□□□□ -0.21
ARL1-206	ENST00000549302	RREB1	Q92766	1687 aa		13.73	□□□□□ -0.21
ARL1-206	ENST00000549302	NLRP2	Q9NX02	1062 aa		13.73	□□□□□ -0.21
ARL1-206	ENST00000549302	MAP3K9	P80192	1104 aa		13.72	□□□□□ -0.21
ARL1-206	ENST00000549302	ARX	Q96QS3	562 aa		13.72	□□□□□ -0.21
ARL1-206	ENST00000549302	TOPAZ1	Q8N9V7	1692 aa		13.72	□□□□□ -0.21
ARL1-206	ENST00000549302	SLIT3	O75094	1523 aa		13.71	□□□□□ -0.21
ARL1-206	ENST00000549302	ACSBG1	Q96GR2	724 aa		13.71	□□□□□ -0.21
ARL1-206	ENST00000549302	PARP4	Q9UKK3	1724 aa	Known RBP	13.7	□□□□□ -0.22
ARL1-206	ENST00000549302	KTN1	Q86UP2	1357 aa	Known RBP	13.7	□□□□□ -0.22
ARL1-206	ENST00000549302	IL2RB	P14784	551 aa		13.69	□□□□□ -0.22
ARL1-206	ENST00000549302	GPR162	Q16538	588 aa		13.69	□□□□□ -0.22
ARL1-206	ENST00000549302	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
ARL1-206	ENST00000549302	L3MBTL2	Q969R5	705 aa		13.69	□□□□□ -0.22
ARL1-206	ENST00000549302	ROCK2	O75116	1388 aa	Known RBP	13.69	□□□□□ -0.22
ARL1-206	ENST00000549302	SENP3-EIF4A1	A0A087X0R7	540 aa		13.68	□□□□□ -0.22
ARL1-206	ENST00000549302	POLD1	P28340	1107 aa		13.68	□□□□□ -0.22
ARL1-206	ENST00000549302	E2F4	Q16254	413 aa		13.68	□□□□□ -0.22
ARL1-206	ENST00000549302	EVI5	O60447	810 aa		13.67	□□□□□ -0.22
ARL1-206	ENST00000549302	KIAA1210	Q9ULL0	1709 aa		13.67	□□□□□ -0.22
ARL1-206	ENST00000549302	TNS2	Q63HR2	1409 aa		13.66	□□□□□ -0.22
ARL1-206	ENST00000549302	LRRC37A3	O60309	1634 aa		13.66	□□□□□ -0.22
ARL1-206	ENST00000549302	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.66	□□□□□ -0.22
ARL1-206	ENST00000549302	ZNF687	Q8N1G0	1237 aa		13.66	□□□□□ -0.22
ARL1-206	ENST00000549302	TMC1	Q8TDI8	760 aa		13.66	□□□□□ -0.22
ARL1-206	ENST00000549302	PEAK1	Q9H792	1746 aa		13.65	□□□□□ -0.22
ARL1-206	ENST00000549302	DPYSL4	O14531	572 aa		13.65	□□□□□ -0.22
ARL1-206	ENST00000549302	C1QTNF8	P60827	252 aa		13.65	□□□□□ -0.22
ARL1-206	ENST00000549302	ANKRD24	Q8TF21	1146 aa		13.65	□□□□□ -0.22
ARL1-206	ENST00000549302	NEUROD1	Q13562	356 aa		13.64	□□□□□ -0.23
ARL1-206	ENST00000549302	SLC27A3	Q5K4L6	730 aa		13.64	□□□□□ -0.23
ARL1-206	ENST00000549302	SLC16A10	Q8TF71	515 aa		13.64	□□□□□ -0.23
ARL1-206	ENST00000549302	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.63	□□□□□ -0.23
ARL1-206	ENST00000549302	RGPD4	Q7Z3J3	1758 aa		13.63	□□□□□ -0.23
ARL1-206	ENST00000549302	NME9	Q86XW9	330 aa		13.63	□□□□□ -0.23
ARL1-206	ENST00000549302	DDX54	Q8TDD1	881 aa	Known RBP	13.63	□□□□□ -0.23
ARL1-206	ENST00000549302	TFCP2L1	Q9NZI6	479 aa		13.63	□□□□□ -0.23
ARL1-206	ENST00000549302	SYTL4	Q96C24	671 aa	Predicted RBP	13.62	□□□□□ -0.23
ARL1-206	ENST00000549302	TERF2IP	Q9NYB0	399 aa		13.62	□□□□□ -0.23
ARL1-206	ENST00000549302	USP31	Q70CQ4	1352 aa		13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	MAP3K5	Q99683	1374 aa		13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	GIGYF1	O75420	1035 aa	Predicted RBP	13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	ZNF827	Q17R98	1081 aa		13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	KRTAP3-3	Q9BYR6	98 aa		13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	KRTAP3-2	Q9BYR7	98 aa		13.61	□□□□□ -0.23
ARL1-206	ENST00000549302	LTV1	Q96GA3	475 aa	Predicted RBP	13.6	□□□□□ -0.23
ARL1-206	ENST00000549302	SIN3A	Q96ST3	1273 aa		13.6	□□□□□ -0.23
ARL1-206	ENST00000549302	LRRC4B	Q9NT99	713 aa		13.6	□□□□□ -0.23
ARL1-206	ENST00000549302	CASZ1	Q86V15	1759 aa		13.6	□□□□□ -0.23
ARL1-206	ENST00000549302	PIK3C2A	O00443	1686 aa		13.59	□□□□□ -0.23
ARL1-206	ENST00000549302	QRICH2	Q9H0J4	1663 aa		13.59	□□□□□ -0.23
ARL1-206	ENST00000549302	CARD11	Q9BXL7	1154 aa		13.59	□□□□□ -0.23
ARL1-206	ENST00000549302	ABCC6	O95255	1503 aa		13.59	□□□□□ -0.23
ARL1-206	ENST00000549302	TRPM1	Q7Z4N2	1603 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	GRIN3B	O60391	1043 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	PPP4R3B	Q5MIZ7	849 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	IP6K1	Q92551	441 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	MYOM1	P52179	1685 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	NFAT5	O94916	1531 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	COL18A1	P39060	1754 aa		13.58	□□□□□ -0.24
ARL1-206	ENST00000549302	HMGB2	P26583	209 aa	Known RBP	13.57	□□□□□ -0.24
ARL1-206	ENST00000549302	PRIM1	P49642	420 aa	Known RBP	13.57	□□□□□ -0.24
ARL1-206	ENST00000549302	ZNF454	Q8N9F8	522 aa		13.57	□□□□□ -0.24
ARL1-206	ENST00000549302	SLC12A5	Q9H2X9	1139 aa		13.57	□□□□□ -0.24
ARL1-206	ENST00000549302	UTRN	P46939	3433 aa		13.57	□□□□□ -0.24
ARL1-206	ENST00000549302	AMPH	P49418	695 aa		13.56	□□□□□ -0.24
ARL1-206	ENST00000549302	COG3	Q96JB2	828 aa		13.56	□□□□□ -0.24
ARL1-206	ENST00000549302	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.56	□□□□□ -0.24
ARL1-206	ENST00000549302	SBNO2	Q9Y2G9	1366 aa		13.56	□□□□□ -0.24
ARL1-206	ENST00000549302	FOSB	P53539	338 aa		13.55	□□□□□ -0.24
ARL1-206	ENST00000549302	CCNL1	Q9UK58	526 aa	Predicted RBP	13.55	□□□□□ -0.24
ARL1-206	ENST00000549302	PNPLA7	Q6ZV29	1317 aa		13.55	□□□□□ -0.24
ARL1-206	ENST00000549302	SBF2	Q86WG5	1849 aa		13.55	□□□□□ -0.24
ARL1-206	ENST00000549302	EDC4	Q6P2E9	1401 aa	Known RBP	13.55	□□□□□ -0.24
ARL1-206	ENST00000549302	KCNQ4	P56696	695 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms