RNA–Protein interactions for RNA: ENST00000549119.1

RNF41-207, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-207ENST00000549119 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 SPATA31A1Q5TZJ5 1347 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 SLIT2O94813 1529 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 HOXB7P09629 217 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 EIF4A1P60842 406 aaKnown RBP11.79□□□□□ -0.52
RNF41-207ENST00000549119 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
RNF41-207ENST00000549119 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
RNF41-207ENST00000549119 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 AAMPQ13685 434 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 KRT24Q2M2I5 525 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
RNF41-207ENST00000549119 DZIP1LQ8IYY4 767 aaKnown RBP11.78□□□□□ -0.52
RNF41-207ENST00000549119 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
RNF41-207ENST00000549119 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 SPATA31A5Q5VU36 1347 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 SPATA31A7Q8IWB4 1347 aa11.78□□□□□ -0.52
RNF41-207ENST00000549119 VPS72Q15906 364 aa11.77□□□□□ -0.53
RNF41-207ENST00000549119 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
RNF41-207ENST00000549119 CCDC136Q96JN2 1154 aa11.77□□□□□ -0.53
RNF41-207ENST00000549119 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
RNF41-207ENST00000549119 PLCH1Q4KWH8 1693 aa11.77□□□□□ -0.53
RNF41-207ENST00000549119 DISP2A7MBM2 1401 aa11.77□□□□□ -0.53
RNF41-207ENST00000549119 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
RNF41-207ENST00000549119 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
RNF41-207ENST00000549119 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
RNF41-207ENST00000549119 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
RNF41-207ENST00000549119 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
RNF41-207ENST00000549119 USP21Q9UK80 565 aa11.76□□□□□ -0.53
RNF41-207ENST00000549119 NWD2Q9ULI1 1742 aa11.76□□□□□ -0.53
RNF41-207ENST00000549119 TCERG1O14776 1098 aaKnown RBP11.75□□□□□ -0.53
RNF41-207ENST00000549119 KCNQ3O43525 872 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 TRIM27P14373 513 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 DDB1Q16531 1140 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 PTPRCP08575 1304 aa11.75□□□□□ -0.53
RNF41-207ENST00000549119 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
RNF41-207ENST00000549119 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
RNF41-207ENST00000549119 DDX19BQ9UMR2 479 aa11.74□□□□□ -0.53
RNF41-207ENST00000549119 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
RNF41-207ENST00000549119 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
RNF41-207ENST00000549119 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
RNF41-207ENST00000549119 MRC1P22897 1456 aa11.73□□□□□ -0.53
RNF41-207ENST00000549119 BCL9LQ86UU0 1499 aa11.73□□□□□ -0.53
RNF41-207ENST00000549119 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
RNF41-207ENST00000549119 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
RNF41-207ENST00000549119 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
RNF41-207ENST00000549119 SCN11AQ9UI33 1791 aa11.73□□□□□ -0.53
RNF41-207ENST00000549119 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
RNF41-207ENST00000549119 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
RNF41-207ENST00000549119 RLBP1P12271 317 aa11.72□□□□□ -0.53
RNF41-207ENST00000549119 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
RNF41-207ENST00000549119 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
RNF41-207ENST00000549119 KDM3BQ7LBC6 1761 aa11.72□□□□□ -0.53
RNF41-207ENST00000549119 LRP6O75581 1613 aa11.71□□□□□ -0.53
RNF41-207ENST00000549119 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
RNF41-207ENST00000549119 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
RNF41-207ENST00000549119 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
RNF41-207ENST00000549119 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
RNF41-207ENST00000549119 TNNQ9UQP3 1299 aa11.71□□□□□ -0.53
RNF41-207ENST00000549119 AFF2P51816 1311 aa11.7□□□□□ -0.54
RNF41-207ENST00000549119 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
RNF41-207ENST00000549119 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
RNF41-207ENST00000549119 ABCC4O15439 1325 aa11.69□□□□□ -0.54
RNF41-207ENST00000549119 FLIIQ13045 1269 aa11.69□□□□□ -0.54
RNF41-207ENST00000549119 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
RNF41-207ENST00000549119 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
RNF41-207ENST00000549119 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
RNF41-207ENST00000549119 A0A0G2JS52 829 aa11.68□□□□□ -0.54
RNF41-207ENST00000549119 MYT1Q01538 1121 aa11.68□□□□□ -0.54
RNF41-207ENST00000549119 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
RNF41-207ENST00000549119 INTS3Q68E01 1043 aaKnown RBP11.68□□□□□ -0.54
RNF41-207ENST00000549119 G2E3Q7L622 706 aa11.68□□□□□ -0.54
RNF41-207ENST00000549119 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
RNF41-207ENST00000549119 HYPKQ9NX55 129 aa11.68□□□□□ -0.54
RNF41-207ENST00000549119 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
RNF41-207ENST00000549119 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
RNF41-207ENST00000549119 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
RNF41-207ENST00000549119 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
RNF41-207ENST00000549119 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
RNF41-207ENST00000549119 PIGBQ92521 554 aa11.67□□□□□ -0.54
RNF41-207ENST00000549119 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF41-207ENST00000549119 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
RNF41-207ENST00000549119 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
RNF41-207ENST00000549119 DDX58O95786 925 aaKnown RBP11.66□□□□□ -0.54
RNF41-207ENST00000549119 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
RNF41-207ENST00000549119 CENPQQ7L2Z9 268 aaPredicted RBP11.66□□□□□ -0.54
RNF41-207ENST00000549119 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms