RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 MYCP01106 439 aaPredicted RBP9.36□□□□□ -0.91
CCDC38-206ENST00000548771 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
CCDC38-206ENST00000548771 RIPOR1Q6ZS17 1223 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
CCDC38-206ENST00000548771 ALG2Q9H553 416 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
CCDC38-206ENST00000548771 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
CCDC38-206ENST00000548771 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
CCDC38-206ENST00000548771 GTPBP3Q969Y2 492 aaKnown RBP9.35□□□□□ -0.91
CCDC38-206ENST00000548771 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
CCDC38-206ENST00000548771 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
CCDC38-206ENST00000548771 BCRP11274 1271 aa9.34□□□□□ -0.91
CCDC38-206ENST00000548771 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
CCDC38-206ENST00000548771 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
CCDC38-206ENST00000548771 PHF20L1A8MW92 1017 aa9.33□□□□□ -0.92
CCDC38-206ENST00000548771 BEND7Q8N7W2 519 aaPredicted RBP9.33□□□□□ -0.92
CCDC38-206ENST00000548771 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
CCDC38-206ENST00000548771 ETNK1Q9HBU6 452 aa9.33□□□□□ -0.92
CCDC38-206ENST00000548771 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
CCDC38-206ENST00000548771 FLIIQ13045 1269 aa9.32□□□□□ -0.92
CCDC38-206ENST00000548771 SEMA3FQ13275 785 aa9.32□□□□□ -0.92
CCDC38-206ENST00000548771 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
CCDC38-206ENST00000548771 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
CCDC38-206ENST00000548771 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
CCDC38-206ENST00000548771 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
CCDC38-206ENST00000548771 SCNN1DP51172 638 aa9.31□□□□□ -0.92
CCDC38-206ENST00000548771 TAS1R3Q7RTX0 852 aa9.31□□□□□ -0.92
CCDC38-206ENST00000548771 GALNT6Q8NCL4 622 aa9.31□□□□□ -0.92
CCDC38-206ENST00000548771 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
CCDC38-206ENST00000548771 PIK3CDO00329 1044 aa9.3□□□□□ -0.92
CCDC38-206ENST00000548771 OXLD1Q5BKU9 147 aa9.3□□□□□ -0.92
CCDC38-206ENST00000548771 PODNQ7Z5L7 613 aa9.3□□□□□ -0.92
CCDC38-206ENST00000548771 THBS1P07996 1170 aa9.29□□□□□ -0.92
CCDC38-206ENST00000548771 SNRPNP63162 240 aaKnown RBP9.29□□□□□ -0.92
CCDC38-206ENST00000548771 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
CCDC38-206ENST00000548771 ZSCAN10Q96SZ4 725 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-206ENST00000548771 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
CCDC38-206ENST00000548771 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
CCDC38-206ENST00000548771 TIMMDC1Q9NPL8 285 aa9.28□□□□□ -0.92
CCDC38-206ENST00000548771 PCDHGA11Q9Y5H2 935 aa9.28□□□□□ -0.92
CCDC38-206ENST00000548771 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
CCDC38-206ENST00000548771 F11P03951 625 aa9.27□□□□□ -0.93
CCDC38-206ENST00000548771 INHAP05111 366 aa9.27□□□□□ -0.93
CCDC38-206ENST00000548771 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
CCDC38-206ENST00000548771 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
CCDC38-206ENST00000548771 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
CCDC38-206ENST00000548771 H7C1W4 665 aa9.26□□□□□ -0.93
CCDC38-206ENST00000548771 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
CCDC38-206ENST00000548771 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
CCDC38-206ENST00000548771 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
CCDC38-206ENST00000548771 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
CCDC38-206ENST00000548771 MX2P20592 715 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 GDF10P55107 478 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 RHBDD1Q8TEB9 315 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
CCDC38-206ENST00000548771 A0A1B0GTH6 734 aa9.24□□□□□ -0.93
CCDC38-206ENST00000548771 SHISA8B8ZZ34 492 aa9.24□□□□□ -0.93
CCDC38-206ENST00000548771 OIP5O43482 229 aa9.24□□□□□ -0.93
CCDC38-206ENST00000548771 RAD21O60216 631 aa9.24□□□□□ -0.93
CCDC38-206ENST00000548771 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
CCDC38-206ENST00000548771 C1orf229Q6ZS94 237 aaPredicted RBP9.24□□□□□ -0.93
CCDC38-206ENST00000548771 FNBP4Q8N3X1 1017 aaPredicted RBP9.24□□□□□ -0.93
CCDC38-206ENST00000548771 KRTAP4-8Q9BYQ9 185 aa9.24□□□□□ -0.93
CCDC38-206ENST00000548771 FURINP09958 794 aa9.23□□□□□ -0.93
CCDC38-206ENST00000548771 PHKA2P46019 1235 aa9.23□□□□□ -0.93
CCDC38-206ENST00000548771 BAG6P46379 1132 aa9.23□□□□□ -0.93
CCDC38-206ENST00000548771 MTFR1Q15390 333 aa9.23□□□□□ -0.93
CCDC38-206ENST00000548771 TMEM214Q6NUQ4 689 aaKnown RBP9.23□□□□□ -0.93
CCDC38-206ENST00000548771 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
CCDC38-206ENST00000548771 SKIP12755 728 aa9.22□□□□□ -0.93
CCDC38-206ENST00000548771 COL8A1P27658 744 aa9.22□□□□□ -0.93
CCDC38-206ENST00000548771 SMTNP53814 917 aa9.22□□□□□ -0.93
CCDC38-206ENST00000548771 TLR1Q15399 786 aa9.22□□□□□ -0.93
CCDC38-206ENST00000548771 WWC1Q8IX03 1113 aa9.22□□□□□ -0.93
CCDC38-206ENST00000548771 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
CCDC38-206ENST00000548771 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
CCDC38-206ENST00000548771 GNASQ5JWF2 1037 aa9.21□□□□□ -0.94
CCDC38-206ENST00000548771 Q8N3U1 123 aa9.21□□□□□ -0.94
CCDC38-206ENST00000548771 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.94
CCDC38-206ENST00000548771 LBRQ14739 615 aaKnown RBP9.2□□□□□ -0.94
CCDC38-206ENST00000548771 EML3Q32P44 896 aa9.2□□□□□ -0.94
CCDC38-206ENST00000548771 UCN2Q96RP3 112 aa9.2□□□□□ -0.94
CCDC38-206ENST00000548771 CFHR5Q9BXR6 569 aa9.2□□□□□ -0.94
CCDC38-206ENST00000548771 MSX1P28360 303 aa9.19□□□□□ -0.94
CCDC38-206ENST00000548771 NCOA4Q13772 614 aa9.19□□□□□ -0.94
CCDC38-206ENST00000548771 HDGFL1Q5TGJ6 251 aa9.19□□□□□ -0.94
CCDC38-206ENST00000548771 CRISPLD1Q9H336 500 aa9.19□□□□□ -0.94
CCDC38-206ENST00000548771 NOD1Q9Y239 953 aa9.19□□□□□ -0.94
CCDC38-206ENST00000548771 CDK2AP1O14519 115 aa9.18□□□□□ -0.94
CCDC38-206ENST00000548771 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
CCDC38-206ENST00000548771 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
CCDC38-206ENST00000548771 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
CCDC38-206ENST00000548771 GPAMQ9HCL2 828 aa9.18□□□□□ -0.94
CCDC38-206ENST00000548771 NDFIP2Q9NV92 336 aa9.18□□□□□ -0.94
CCDC38-206ENST00000548771 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms