RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
SLC48A1-206ENST00000548498 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
SLC48A1-206ENST00000548498 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
SLC48A1-206ENST00000548498 FYB1O15117 783 aa13.59□□□□□ -0.23
SLC48A1-206ENST00000548498 SSFA2P28290 1259 aa13.59□□□□□ -0.23
SLC48A1-206ENST00000548498 PIGBQ92521 554 aa13.59□□□□□ -0.23
SLC48A1-206ENST00000548498 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
SLC48A1-206ENST00000548498 ITPK1Q13572 414 aa13.58□□□□□ -0.24
SLC48A1-206ENST00000548498 NMRK2Q9NPI5 230 aa13.58□□□□□ -0.24
SLC48A1-206ENST00000548498 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
SLC48A1-206ENST00000548498 TJP1Q07157 1748 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 GNPATO15228 680 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 TOMM70O94826 608 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 MMP10P09238 476 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 SIK1P57059 783 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 DLEC1Q9Y238 1755 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 KDRP35968 1356 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
SLC48A1-206ENST00000548498 AFDNP55196 1824 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-206ENST00000548498 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
SLC48A1-206ENST00000548498 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 HTRA3P83110 453 aa13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 CCER1Q8TC90 406 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
SLC48A1-206ENST00000548498 PCNTO95613 3336 aa13.54□□□□□ -0.24
SLC48A1-206ENST00000548498 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
SLC48A1-206ENST00000548498 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
SLC48A1-206ENST00000548498 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
SLC48A1-206ENST00000548498 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
SLC48A1-206ENST00000548498 ATP6V1AP38606 617 aa13.52□□□□□ -0.25
SLC48A1-206ENST00000548498 COL13A1Q5TAT6 717 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-206ENST00000548498 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.25
SLC48A1-206ENST00000548498 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 DPEP1P16444 411 aa13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 TGFB2P61812 414 aa13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
SLC48A1-206ENST00000548498 RBM46Q8TBY0 533 aaKnown RBP13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 KLRG1Q96E93 195 aa13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
SLC48A1-206ENST00000548498 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 CAPN15O75808 1086 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 FCHSD2O94868 740 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 PHKG2P15735 406 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 NRXN2Q9P2S2 1712 aa13.49□□□□□ -0.25
SLC48A1-206ENST00000548498 GYS1P13807 737 aa13.48□□□□□ -0.25
SLC48A1-206ENST00000548498 KCNA3P22001 575 aa13.48□□□□□ -0.25
SLC48A1-206ENST00000548498 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
SLC48A1-206ENST00000548498 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 EYA1Q99502 592 aa13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
SLC48A1-206ENST00000548498 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
SLC48A1-206ENST00000548498 HSPA5P11021 654 aaKnown RBP13.46□□□□□ -0.25
SLC48A1-206ENST00000548498 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
SLC48A1-206ENST00000548498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
SLC48A1-206ENST00000548498 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.26
SLC48A1-206ENST00000548498 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
SLC48A1-206ENST00000548498 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-206ENST00000548498 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 FSTL1Q12841 308 aa13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 RNF181Q9P0P0 153 aa13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 PARP3Q9Y6F1 533 aa13.44□□□□□ -0.26
SLC48A1-206ENST00000548498 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 RFC4P35249 363 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 DDR1Q08345 913 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 FER1L6Q2WGJ9 1857 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 RRAGCQ9HB90 399 aa13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
SLC48A1-206ENST00000548498 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
SLC48A1-206ENST00000548498 CHRNA5P30532 468 aa13.42□□□□□ -0.26
SLC48A1-206ENST00000548498 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
SLC48A1-206ENST00000548498 PIM2Q9P1W9 311 aa13.42□□□□□ -0.26
SLC48A1-206ENST00000548498 UBR2Q8IWV8 1755 aa13.41□□□□□ -0.26
SLC48A1-206ENST00000548498 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-206ENST00000548498 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-206ENST00000548498 USP42Q9H9J4 1324 aaKnown RBP13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 PRELPP51888 382 aa13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 RASSF7Q02833 373 aa13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 FKBP8Q14318 412 aa13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
SLC48A1-206ENST00000548498 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
SLC48A1-206ENST00000548498 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms