RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
CALCOCO1-211ENST00000548431 SLC52A2Q9HAB3 445 aa9.26□□□□□ -0.93
CALCOCO1-211ENST00000548431 RGPD3A6NKT7 1758 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO1-211ENST00000548431 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
CALCOCO1-211ENST00000548431 RGPD4Q7Z3J3 1758 aa9.26□□□□□ -0.93
CALCOCO1-211ENST00000548431 CHL1O00533 1208 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 POTEAQ6S8J7 498 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 ITGB4P16144 1822 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 RREB1Q92766 1687 aa9.25□□□□□ -0.93
CALCOCO1-211ENST00000548431 BTAF1O14981 1849 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 HOXB7P09629 217 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 DCTN1Q14203 1278 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
CALCOCO1-211ENST00000548431 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 LGR6Q9HBX8 967 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 MBIPQ9NS73 344 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
CALCOCO1-211ENST00000548431 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 SMARCC1Q92922 1105 aaPredicted RBP9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 CACNA1FO60840 1977 aa9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 UBR2Q8IWV8 1755 aa9.22□□□□□ -0.93
CALCOCO1-211ENST00000548431 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
CALCOCO1-211ENST00000548431 ZNF790Q6PG37 636 aa9.21□□□□□ -0.94
CALCOCO1-211ENST00000548431 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
CALCOCO1-211ENST00000548431 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 TUBGCP6Q96RT7 1819 aa9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 TSR2Q969E8 191 aaKnown RBP9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 TEX13AQ9BXU3 409 aaPredicted RBP9.2□□□□□ -0.94
CALCOCO1-211ENST00000548431 LAMB4A4D0S4 1761 aa9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 TWISTNBQ3B726 338 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 ILDR2Q71H61 639 aa9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 RCAN3Q9UKA8 241 aa9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 CICQ96RK0 1608 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 LY75O60449 1722 aa9.19□□□□□ -0.94
CALCOCO1-211ENST00000548431 SNRPA1P09661 255 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 EIF4A1P60842 406 aaKnown RBP9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 KIF16BQ96L93 1317 aa9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 STK31Q9BXU1 1019 aa9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO1-211ENST00000548431 TAF1LQ8IZX4 1826 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 HEG1Q9ULI3 1381 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 MS4A1P11836 297 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 PIGBQ92521 554 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CALCOCO1-211ENST00000548431 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 C5P01031 1676 aa9.16□□□□□ -0.94
CALCOCO1-211ENST00000548431 PALLDQ8WX93 1383 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 VAMP4O75379 141 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 STARD3NLO95772 234 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 CANXP27824 592 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 ATG3Q9NT62 314 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-211ENST00000548431 TJP1Q07157 1748 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 NEFLP07196 543 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 RARSP54136 660 aaKnown RBP9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 SLC39A6Q13433 755 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
CALCOCO1-211ENST00000548431 PTPRCP08575 1304 aa9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 PTCD1O75127 700 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 SIK1P57059 783 aa9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
CALCOCO1-211ENST00000548431 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms