RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
C12orf54-203ENST00000548364 HMOX1P09601 288 aa15.42■□□□□ 0.06
C12orf54-203ENST00000548364 CABP4P57796 275 aa15.42■□□□□ 0.06
C12orf54-203ENST00000548364 ZNF827Q17R98 1081 aa15.42■□□□□ 0.06
C12orf54-203ENST00000548364 NEFMP07197 916 aa15.41■□□□□ 0.06
C12orf54-203ENST00000548364 AK7Q96M32 723 aa15.41■□□□□ 0.06
C12orf54-203ENST00000548364 LOC102724428A0A0B4J2F2 783 aa15.4■□□□□ 0.06
C12orf54-203ENST00000548364 SIK1P57059 783 aa15.4■□□□□ 0.06
C12orf54-203ENST00000548364 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
C12orf54-203ENST00000548364 PNPLA7Q6ZV29 1317 aa15.39■□□□□ 0.05
C12orf54-203ENST00000548364 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
C12orf54-203ENST00000548364 PNNQ9H307 717 aaKnown RBP15.38■□□□□ 0.05
C12orf54-203ENST00000548364 TJP1Q07157 1748 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 FCHSD2O94868 740 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 ZBTB7AO95365 584 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
C12orf54-203ENST00000548364 SSFA2P28290 1259 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 POLD1P28340 1107 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
C12orf54-203ENST00000548364 SLC52A2Q9HAB3 445 aa15.37■□□□□ 0.05
C12orf54-203ENST00000548364 MYBBP1AQ9BQG0 1328 aaKnown RBP15.37■□□□□ 0.05
C12orf54-203ENST00000548364 GNAT3A8MTJ3 354 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 MTHFSDQ2M296 383 aaKnown RBP15.36■□□□□ 0.05
C12orf54-203ENST00000548364 RSPH6AQ9H0K4 717 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
C12orf54-203ENST00000548364 RNMTO43148 476 aaKnown RBP15.35■□□□□ 0.05
C12orf54-203ENST00000548364 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
C12orf54-203ENST00000548364 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
C12orf54-203ENST00000548364 TEFQ10587 303 aa15.34■□□□□ 0.05
C12orf54-203ENST00000548364 DDX10Q13206 875 aaKnown RBP15.34■□□□□ 0.05
C12orf54-203ENST00000548364 KCNQ4P56696 695 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 TTC5Q8N0Z6 440 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
C12orf54-203ENST00000548364 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.04
C12orf54-203ENST00000548364 PTGER2P43116 358 aa15.32■□□□□ 0.04
C12orf54-203ENST00000548364 RTF1Q92541 710 aaKnown RBP15.32■□□□□ 0.04
C12orf54-203ENST00000548364 MAPK8IP3Q9UPT6 1336 aa15.32■□□□□ 0.04
C12orf54-203ENST00000548364 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
C12orf54-203ENST00000548364 GNPATO15228 680 aa15.31■□□□□ 0.04
C12orf54-203ENST00000548364 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
C12orf54-203ENST00000548364 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
C12orf54-203ENST00000548364 LINC00116Q8NCU8 138 aa15.31■□□□□ 0.04
C12orf54-203ENST00000548364 ARXQ96QS3 562 aa15.31■□□□□ 0.04
C12orf54-203ENST00000548364 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
C12orf54-203ENST00000548364 PDGFDQ9GZP0 370 aaPredicted RBP15.31■□□□□ 0.04
C12orf54-203ENST00000548364 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
C12orf54-203ENST00000548364 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
C12orf54-203ENST00000548364 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
C12orf54-203ENST00000548364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
C12orf54-203ENST00000548364 ITPK1Q13572 414 aa15.29■□□□□ 0.04
C12orf54-203ENST00000548364 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
C12orf54-203ENST00000548364 MYH14Q7Z406 1995 aaKnown RBP15.28■□□□□ 0.04
C12orf54-203ENST00000548364 PTCD1O75127 700 aaKnown RBP15.28■□□□□ 0.04
C12orf54-203ENST00000548364 PHF14O94880 888 aa15.28■□□□□ 0.04
C12orf54-203ENST00000548364 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
C12orf54-203ENST00000548364 LGR6Q9HBX8 967 aa15.27■□□□□ 0.04
C12orf54-203ENST00000548364 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
C12orf54-203ENST00000548364 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
C12orf54-203ENST00000548364 KDM3BQ7LBC6 1761 aa15.26■□□□□ 0.03
C12orf54-203ENST00000548364 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
C12orf54-203ENST00000548364 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
C12orf54-203ENST00000548364 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
C12orf54-203ENST00000548364 PHACTR3Q96KR7 559 aa15.25■□□□□ 0.03
C12orf54-203ENST00000548364 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
C12orf54-203ENST00000548364 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
C12orf54-203ENST00000548364 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 STARD3NLO95772 234 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 SLC4A9Q96Q91 983 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 SCN7AQ01118 1682 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 HEG1Q9ULI3 1381 aa15.24■□□□□ 0.03
C12orf54-203ENST00000548364 KIF13BQ9NQT8 1826 aa15.23■□□□□ 0.03
C12orf54-203ENST00000548364 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
C12orf54-203ENST00000548364 RFC4P35249 363 aa15.23■□□□□ 0.03
C12orf54-203ENST00000548364 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
C12orf54-203ENST00000548364 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
C12orf54-203ENST00000548364 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
C12orf54-203ENST00000548364 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
C12orf54-203ENST00000548364 SLC39A6Q13433 755 aa15.22■□□□□ 0.03
C12orf54-203ENST00000548364 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
C12orf54-203ENST00000548364 NLGN1Q8N2Q7 840 aa15.22■□□□□ 0.03
C12orf54-203ENST00000548364 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
C12orf54-203ENST00000548364 COL15A1P39059 1388 aa15.22■□□□□ 0.03
C12orf54-203ENST00000548364 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
C12orf54-203ENST00000548364 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
C12orf54-203ENST00000548364 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
C12orf54-203ENST00000548364 CHD4Q14839 1912 aa15.2■□□□□ 0.02
C12orf54-203ENST00000548364 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
C12orf54-203ENST00000548364 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
C12orf54-203ENST00000548364 CD2APQ9Y5K6 639 aa15.2■□□□□ 0.02
C12orf54-203ENST00000548364 SOS1Q07889 1333 aaPredicted RBP15.19■□□□□ 0.02
C12orf54-203ENST00000548364 USP42Q9H9J4 1324 aaKnown RBP15.19■□□□□ 0.02
C12orf54-203ENST00000548364 BCORQ6W2J9 1755 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms