RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 SCN11AQ9UI33 1791 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 C5P01031 1676 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 ABCC6O95255 1503 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 SSFA2P28290 1259 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 PDE1AP54750 535 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 GAS2L3Q86XJ1 694 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 MIS18AQ9NYP9 233 aa8.84□□□□□ -0.99
PDZRN4-204ENST00000548316 COL18A1P39060 1754 aa8.84□□□□□ -1
PDZRN4-204ENST00000548316 AOX1Q06278 1338 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 GOLGA6L3A6NEY3 463 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 ATP8B2P98198 1209 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 PANK2Q9BZ23 570 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 HSP90AB1P08238 724 aaKnown RBP8.83□□□□□ -1
PDZRN4-204ENST00000548316 PTMSP20962 102 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 MRE11P49959 708 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 ZDHHC9Q9Y397 364 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 HEG1Q9ULI3 1381 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 GLI3P10071 1580 aa8.83□□□□□ -1
PDZRN4-204ENST00000548316 F6X3S4 739 aa8.82□□□□□ -1
PDZRN4-204ENST00000548316 POLA2Q14181 598 aa8.82□□□□□ -1
PDZRN4-204ENST00000548316 EID1Q9Y6B2 187 aa8.82□□□□□ -1
PDZRN4-204ENST00000548316 KIF1AQ12756 1690 aa8.82□□□□□ -1
PDZRN4-204ENST00000548316 BAG4O95429 457 aaKnown RBP8.82□□□□□ -1
PDZRN4-204ENST00000548316 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
PDZRN4-204ENST00000548316 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
PDZRN4-204ENST00000548316 GNAI2P04899 355 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 FLIIQ13045 1269 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 GBP4Q96PP9 640 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 GRPEL1Q9HAV7 217 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 PXDNQ92626 1479 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 NUTM2FA1L443 756 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 EPB41L2O43491 1005 aaKnown RBP8.81□□□□□ -1
PDZRN4-204ENST00000548316 KCNA6P17658 529 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 CUL4AQ13619 759 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 SSH3Q8TE77 659 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 MRC1P22897 1456 aa8.81□□□□□ -1
PDZRN4-204ENST00000548316 USP42Q9H9J4 1324 aaKnown RBP8.8□□□□□ -1
PDZRN4-204ENST00000548316 ERC2O15083 957 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 HMMRO75330 724 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 THEMISQ8N1K5 641 aaPredicted RBP8.8□□□□□ -1
PDZRN4-204ENST00000548316 USP44Q9H0E7 712 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 CCDC30Q5VVM6 783 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 ESYT1Q9BSJ8 1104 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
PDZRN4-204ENST00000548316 LMBRD1Q9NUN5 540 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 PKD1L3Q7Z443 1732 aa8.8□□□□□ -1
PDZRN4-204ENST00000548316 PLEKHG5O94827 1062 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 ZNF445P59923 1031 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
PDZRN4-204ENST00000548316 IP6K1Q92551 441 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
PDZRN4-204ENST00000548316 GNAI3P08754 354 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 HOXB7P09629 217 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 PARP4Q9UKK3 1724 aaKnown RBP8.79□□□□□ -1
PDZRN4-204ENST00000548316 CHMLP26374 656 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 AMPHP49418 695 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 RTF1Q92541 710 aaKnown RBP8.79□□□□□ -1
PDZRN4-204ENST00000548316 PPP1R9BQ96SB3 815 aa8.79□□□□□ -1
PDZRN4-204ENST00000548316 ADCY9O60503 1353 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 SETD1BQ9UPS6 1966 aaKnown RBP8.78□□□□□ -1
PDZRN4-204ENST00000548316 EIF4A1P60842 406 aaKnown RBP8.78□□□□□ -1
PDZRN4-204ENST00000548316 PKP1Q13835 747 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
PDZRN4-204ENST00000548316 LAMB4A4D0S4 1761 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 REC8O95072 547 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 CLCN1P35523 988 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 ANAPC15P60006 121 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 NUCB2P80303 420 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
PDZRN4-204ENST00000548316 TCHHQ07283 1943 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 ERBB4Q15303 1308 aa8.78□□□□□ -1
PDZRN4-204ENST00000548316 NLRP6P59044 892 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 PI4K2BQ8TCG2 481 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 IL25Q9H293 177 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 MX1P20591 662 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 ZGPATQ8N5A5 531 aaKnown RBP8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 LRRCC1Q9C099 1032 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 PALD1Q9ULE6 856 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 EXOC6BQ9Y2D4 811 aa8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 LRRFIP2Q9Y608 721 aaKnown RBP8.77□□□□□ -1.01
PDZRN4-204ENST00000548316 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 PLPPR3Q6T4P5 718 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 FOXD4L1Q9NU39 408 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 MTX1Q13505 466 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 BEND3Q5T5X7 828 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 NBPF6Q5VWK0 638 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 NBPF4Q96M43 638 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
PDZRN4-204ENST00000548316 NUP188Q5SRE5 1749 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 RAB11FIP3O75154 756 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms