RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 DOLKQ9UPQ8 538 aa8.31□□□□□ -1.08
RPAP3-206ENST00000548296 A0A1B0GTH6 734 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 IL2RAP01589 272 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 TMEM214Q6NUQ4 689 aaKnown RBP8.3□□□□□ -1.08
RPAP3-206ENST00000548296 RNF135Q8IUD6 432 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 PHTF2Q8N3S3 785 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 NUCKS1Q9H1E3 243 aaKnown RBP8.3□□□□□ -1.08
RPAP3-206ENST00000548296 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
RPAP3-206ENST00000548296 A6NJR5 290 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 GPR25O00155 361 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 IRF5Q13568 498 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 HRH3Q9Y5N1 445 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 IGF1RP08069 1367 aa8.29□□□□□ -1.08
RPAP3-206ENST00000548296 MX2P20592 715 aa8.28□□□□□ -1.08
RPAP3-206ENST00000548296 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
RPAP3-206ENST00000548296 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
RPAP3-206ENST00000548296 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
RPAP3-206ENST00000548296 CSB-PGBD3P0DP91 1061 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 BCRP11274 1271 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 IRS1P35568 1242 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 SOX11P35716 441 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 CHIC2Q9UKJ5 165 aa8.27□□□□□ -1.09
RPAP3-206ENST00000548296 ABL2P42684 1182 aa8.26□□□□□ -1.09
RPAP3-206ENST00000548296 MAP2K3P46734 347 aa8.26□□□□□ -1.09
RPAP3-206ENST00000548296 SEMA3FQ13275 785 aa8.26□□□□□ -1.09
RPAP3-206ENST00000548296 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
RPAP3-206ENST00000548296 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
RPAP3-206ENST00000548296 PHF20L1A8MW92 1017 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
RPAP3-206ENST00000548296 PHKA2P46019 1235 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 VAC14Q08AM6 782 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 BEND7Q8N7W2 519 aaPredicted RBP8.25□□□□□ -1.09
RPAP3-206ENST00000548296 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
RPAP3-206ENST00000548296 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
RPAP3-206ENST00000548296 IGHA1P01876 353 aa8.24□□□□□ -1.09
RPAP3-206ENST00000548296 FOXK2Q01167 660 aa8.24□□□□□ -1.09
RPAP3-206ENST00000548296 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
RPAP3-206ENST00000548296 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
RPAP3-206ENST00000548296 NEDD1Q8NHV4 660 aa8.24□□□□□ -1.09
RPAP3-206ENST00000548296 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
RPAP3-206ENST00000548296 TLR1Q15399 786 aa8.23□□□□□ -1.09
RPAP3-206ENST00000548296 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
RPAP3-206ENST00000548296 EFHC2Q5JST6 749 aa8.23□□□□□ -1.09
RPAP3-206ENST00000548296 ACDQ96AP0 544 aa8.23□□□□□ -1.09
RPAP3-206ENST00000548296 ETNK1Q9HBU6 452 aa8.23□□□□□ -1.09
RPAP3-206ENST00000548296 HOMEZQ8IX15 550 aa8.22□□□□□ -1.09
RPAP3-206ENST00000548296 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
RPAP3-206ENST00000548296 OIP5O43482 229 aa8.21□□□□□ -1.1
RPAP3-206ENST00000548296 INHAP05111 366 aa8.21□□□□□ -1.1
RPAP3-206ENST00000548296 MSX1P28360 303 aa8.21□□□□□ -1.1
RPAP3-206ENST00000548296 WWC1Q8IX03 1113 aa8.21□□□□□ -1.1
RPAP3-206ENST00000548296 C1orf216Q8TAB5 229 aa8.21□□□□□ -1.1
RPAP3-206ENST00000548296 OXCT2Q9BYC2 517 aaPredicted RBP8.21□□□□□ -1.1
RPAP3-206ENST00000548296 GDF10P55107 478 aa8.2□□□□□ -1.1
RPAP3-206ENST00000548296 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
RPAP3-206ENST00000548296 GDF2Q9UK05 429 aaPredicted RBP8.2□□□□□ -1.1
RPAP3-206ENST00000548296 ATXN7L1Q9ULK2 861 aaPredicted RBP8.2□□□□□ -1.1
RPAP3-206ENST00000548296 LZTS3O60299 673 aaPredicted RBP8.19□□□□□ -1.1
RPAP3-206ENST00000548296 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
RPAP3-206ENST00000548296 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
RPAP3-206ENST00000548296 NIFKQ9BYG3 293 aaKnown RBP8.19□□□□□ -1.1
RPAP3-206ENST00000548296 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
RPAP3-206ENST00000548296 RUBCNLQ9H714 662 aa8.19□□□□□ -1.1
RPAP3-206ENST00000548296 SCNN1DP51172 638 aa8.18□□□□□ -1.1
RPAP3-206ENST00000548296 SMTNP53814 917 aa8.18□□□□□ -1.1
RPAP3-206ENST00000548296 PROSER2Q86WR7 435 aaPredicted RBP8.18□□□□□ -1.1
RPAP3-206ENST00000548296 FNBP4Q8N3X1 1017 aaPredicted RBP8.18□□□□□ -1.1
RPAP3-206ENST00000548296 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
RPAP3-206ENST00000548296 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
RPAP3-206ENST00000548296 RAD21O60216 631 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 THBS1P07996 1170 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 GOLGA6L1Q8N7Z2 621 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 KLRG1Q96E93 195 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
RPAP3-206ENST00000548296 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
RPAP3-206ENST00000548296 PLA2G4AP47712 749 aa8.16□□□□□ -1.1
RPAP3-206ENST00000548296 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
RPAP3-206ENST00000548296 NLRP8Q86W28 1048 aa8.16□□□□□ -1.1
RPAP3-206ENST00000548296 POM121Q96HA1 1249 aa8.16□□□□□ -1.1
RPAP3-206ENST00000548296 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
RPAP3-206ENST00000548296 CDK2AP1O14519 115 aa8.15□□□□□ -1.1
RPAP3-206ENST00000548296 BMP4P12644 408 aa8.15□□□□□ -1.1
RPAP3-206ENST00000548296 SUZ12Q15022 739 aaKnown RBP8.15□□□□□ -1.1
RPAP3-206ENST00000548296 EML3Q32P44 896 aa8.15□□□□□ -1.1
RPAP3-206ENST00000548296 NFATC2IPQ8NCF5 419 aa8.15□□□□□ -1.1
RPAP3-206ENST00000548296 GALNT6Q8NCL4 622 aa8.15□□□□□ -1.1
RPAP3-206ENST00000548296 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 BACH1O14867 736 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 BNIP3LO60238 219 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 FGFR3P22607 806 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 NBPF1Q3BBV0 1214 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms