RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.48□□□□□ -0.89
RNF41-204ENST00000548120 MLLT1Q03111 559 aaPredicted RBP9.48□□□□□ -0.89
RNF41-204ENST00000548120 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
RNF41-204ENST00000548120 USP54Q70EL1 1684 aa9.48□□□□□ -0.89
RNF41-204ENST00000548120 PALLDQ8WX93 1383 aa9.48□□□□□ -0.89
RNF41-204ENST00000548120 POTEIP0CG38 1075 aa9.47□□□□□ -0.89
RNF41-204ENST00000548120 ABHD8Q96I13 439 aa9.47□□□□□ -0.89
RNF41-204ENST00000548120 TTC21AQ8NDW8 1320 aa9.47□□□□□ -0.89
RNF41-204ENST00000548120 CENPJQ9HC77 1338 aaPredicted RBP9.47□□□□□ -0.89
RNF41-204ENST00000548120 MMP10P09238 476 aa9.46□□□□□ -0.9
RNF41-204ENST00000548120 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
RNF41-204ENST00000548120 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.9
RNF41-204ENST00000548120 PRDM10Q9NQV6 1147 aa9.46□□□□□ -0.9
RNF41-204ENST00000548120 NSD3Q9BZ95 1437 aa9.46□□□□□ -0.9
RNF41-204ENST00000548120 TOGARAM1Q9Y4F4 1720 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 DPEP1P16444 411 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 TGFB2P61812 414 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
RNF41-204ENST00000548120 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
RNF41-204ENST00000548120 SSFA2P28290 1259 aa9.44□□□□□ -0.9
RNF41-204ENST00000548120 CTCFP49711 727 aaPredicted RBP9.44□□□□□ -0.9
RNF41-204ENST00000548120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
RNF41-204ENST00000548120 ZCRB1Q8TBF4 217 aaKnown RBP9.44□□□□□ -0.9
RNF41-204ENST00000548120 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
RNF41-204ENST00000548120 MEGF6O75095 1541 aa9.44□□□□□ -0.9
RNF41-204ENST00000548120 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
RNF41-204ENST00000548120 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
RNF41-204ENST00000548120 LBX1P52954 281 aa9.43□□□□□ -0.9
RNF41-204ENST00000548120 GNPATO15228 680 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 HMGB2P26583 209 aaKnown RBP9.42□□□□□ -0.9
RNF41-204ENST00000548120 NBPF1Q3BBV0 1214 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 NME9Q86XW9 330 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 MIER1Q8N108 512 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 KAT6BQ8WYB5 2073 aa9.42□□□□□ -0.9
RNF41-204ENST00000548120 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
RNF41-204ENST00000548120 VEGFAP15692 232 aaPredicted RBP9.41□□□□□ -0.9
RNF41-204ENST00000548120 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
RNF41-204ENST00000548120 CCDC87Q9NVE4 849 aa9.41□□□□□ -0.9
RNF41-204ENST00000548120 USP31Q70CQ4 1352 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 KIAA1210Q9ULL0 1709 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 RASSF7Q02833 373 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
RNF41-204ENST00000548120 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
RNF41-204ENST00000548120 CNTNAP1P78357 1384 aa9.39□□□□□ -0.91
RNF41-204ENST00000548120 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
RNF41-204ENST00000548120 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
RNF41-204ENST00000548120 LTN1O94822 1766 aa9.39□□□□□ -0.91
RNF41-204ENST00000548120 GLTPD2A6NH11 291 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 KCNA3P22001 575 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 IP6K1Q92551 441 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 SMARCC1Q92922 1105 aaPredicted RBP9.38□□□□□ -0.91
RNF41-204ENST00000548120 L3MBTL2Q969R5 705 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 FAM208AQ9UK61 1670 aaKnown RBP9.38□□□□□ -0.91
RNF41-204ENST00000548120 UBR3Q6ZT12 1888 aa9.38□□□□□ -0.91
RNF41-204ENST00000548120 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
RNF41-204ENST00000548120 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
RNF41-204ENST00000548120 RGS19P49795 217 aa9.37□□□□□ -0.91
RNF41-204ENST00000548120 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
RNF41-204ENST00000548120 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
RNF41-204ENST00000548120 KIF13BQ9NQT8 1826 aa9.37□□□□□ -0.91
RNF41-204ENST00000548120 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 VEGFBP49765 207 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 SIK1P57059 783 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 TMF1P82094 1093 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 NLGN1Q8N2Q7 840 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 RAPGEF4Q8WZA2 1011 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 SBNO2Q9Y2G9 1366 aa9.36□□□□□ -0.91
RNF41-204ENST00000548120 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
RNF41-204ENST00000548120 CHRNA5P30532 468 aa9.35□□□□□ -0.91
RNF41-204ENST00000548120 ITPK1Q13572 414 aa9.35□□□□□ -0.91
RNF41-204ENST00000548120 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
RNF41-204ENST00000548120 POTECB2RU33 542 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 LMNB1P20700 586 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 HOXC9P31274 260 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 PIGBQ92521 554 aa9.34□□□□□ -0.91
RNF41-204ENST00000548120 MON2Q7Z3U7 1717 aa9.34□□□□□ -0.92
RNF41-204ENST00000548120 CGNL1Q0VF96 1302 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 GYS1P13807 737 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
RNF41-204ENST00000548120 AMPHP49418 695 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
RNF41-204ENST00000548120 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
RNF41-204ENST00000548120 MAP3K19Q56UN5 1328 aa9.32□□□□□ -0.92
RNF41-204ENST00000548120 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms