RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 OSBPL3Q9H4L5 887 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 RNF144AP50876 292 aaPredicted RBP7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
TRAFD1-204ENST00000548092 APBB1O00213 710 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 TRAK2O60296 914 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 RHOQP17081 205 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 ITGA6P23229 1130 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 VWA5B2Q8N398 1253 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 ADAMTS12P58397 1594 aa7.53□□□□□ -1.2
TRAFD1-204ENST00000548092 MEN1O00255 615 aa7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 VAC14Q08AM6 782 aa7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 KIF21BO75037 1637 aa7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 ABCA5Q8WWZ7 1642 aa7.52□□□□□ -1.21
TRAFD1-204ENST00000548092 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
TRAFD1-204ENST00000548092 ABL2P42684 1182 aa7.51□□□□□ -1.21
TRAFD1-204ENST00000548092 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
TRAFD1-204ENST00000548092 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
TRAFD1-204ENST00000548092 TEX14Q8IWB6 1497 aa7.5□□□□□ -1.21
TRAFD1-204ENST00000548092 RNFT1Q5M7Z0 435 aa7.5□□□□□ -1.21
TRAFD1-204ENST00000548092 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
TRAFD1-204ENST00000548092 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 CDC14CA4D256 554 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 HSPA2P54652 639 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 POU4F2Q12837 409 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 MCM6Q14566 821 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 GRIP2Q9C0E4 1043 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 ARHGEF10LQ9HCE6 1279 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 MAP3K4Q9Y6R4 1608 aa7.49□□□□□ -1.21
TRAFD1-204ENST00000548092 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 EIF4G2P78344 907 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 CLN3Q13286 438 aa7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 CYP2U1Q7Z449 544 aa7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 PRM3Q9NNZ6 103 aa7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 PLB1Q6P1J6 1458 aa7.48□□□□□ -1.21
TRAFD1-204ENST00000548092 IL2RAP01589 272 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 GPC1P35052 558 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 CHIC2Q9UKJ5 165 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 COG6Q9Y2V7 657 aa7.47□□□□□ -1.21
TRAFD1-204ENST00000548092 MED1Q15648 1581 aaPredicted RBP7.46□□□□□ -1.21
TRAFD1-204ENST00000548092 ASXL2Q76L83 1435 aa7.46□□□□□ -1.21
TRAFD1-204ENST00000548092 SLC27A3Q5K4L6 730 aa7.46□□□□□ -1.22
TRAFD1-204ENST00000548092 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
TRAFD1-204ENST00000548092 HRH3Q9Y5N1 445 aa7.46□□□□□ -1.22
TRAFD1-204ENST00000548092 GNRH1P01148 92 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 CENPCQ03188 943 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 DBN1Q16643 649 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 CNKSR1Q969H4 720 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 POM121Q96HA1 1249 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 ESYT1Q9BSJ8 1104 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 ESF1Q9H501 851 aaKnown RBP7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 ABCA10Q8WWZ4 1543 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 MADDQ8WXG6 1647 aa7.45□□□□□ -1.22
TRAFD1-204ENST00000548092 EPRSP07814 1512 aaKnown RBP7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 CUX1P39880 1505 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 RUSC2Q8N2Y8 1516 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 KIAA0586Q9BVV6 1533 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 SLFNL1Q499Z3 407 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 NBPF10Q6P3W6 841 aaKnown RBP7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 RNF135Q8IUD6 432 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 NBPF15Q8N660 670 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 WHAMMQ8TF30 809 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 XAGE2Q96GT9 111 aa7.44□□□□□ -1.22
TRAFD1-204ENST00000548092 ABCC2Q92887 1545 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 SPATA31C2B4DYI2 1134 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 WASHC4Q2M389 1173 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 GAS2L1Q99501 681 aaPredicted RBP7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 FHAD1B1AJZ9 1412 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 IQSEC2Q5JU85 1478 aa7.43□□□□□ -1.22
TRAFD1-204ENST00000548092 GPR25O00155 361 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 USP4Q13107 963 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 GAS6Q14393 721 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 FHDC1Q9C0D6 1143 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
TRAFD1-204ENST00000548092 BCORL1Q5H9F3 1711 aa7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 PHKA2P46019 1235 aa7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 SEMA3FQ13275 785 aa7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 RIPOR1Q6ZS17 1223 aa7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 TRIM22Q8IYM9 498 aa7.41□□□□□ -1.22
TRAFD1-204ENST00000548092 SLURP2P0DP57 97 aa7.4□□□□□ -1.22
TRAFD1-204ENST00000548092 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms