RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 MTFR1LQ9H019 292 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 CCNL1Q9UK58 526 aaPredicted RBP9.21□□□□□ -0.94
SCAF11-211ENST00000547950 NUP188Q5SRE5 1749 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 WASHC2AQ641Q2 1341 aa9.21□□□□□ -0.94
SCAF11-211ENST00000547950 LTN1O94822 1766 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 CYP27B1O15528 508 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 PYGBP11216 843 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 EYA1Q99502 592 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 SPG7Q9UQ90 795 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 KIF24Q5T7B8 1368 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 RREB1Q92766 1687 aa9.2□□□□□ -0.94
SCAF11-211ENST00000547950 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
SCAF11-211ENST00000547950 ARXQ96QS3 562 aa9.19□□□□□ -0.94
SCAF11-211ENST00000547950 FHDC1Q9C0D6 1143 aaPredicted RBP9.19□□□□□ -0.94
SCAF11-211ENST00000547950 PCDH11XQ9BZA7 1347 aa9.19□□□□□ -0.94
SCAF11-211ENST00000547950 PCDH11YQ9BZA8 1340 aa9.19□□□□□ -0.94
SCAF11-211ENST00000547950 NSD2O96028 1365 aa9.18□□□□□ -0.94
SCAF11-211ENST00000547950 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
SCAF11-211ENST00000547950 EIF4A2Q14240 407 aaKnown RBP9.18□□□□□ -0.94
SCAF11-211ENST00000547950 SYT17Q9BSW7 474 aa9.18□□□□□ -0.94
SCAF11-211ENST00000547950 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
SCAF11-211ENST00000547950 PNPLA7Q6ZV29 1317 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 SEC24BO95487 1268 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 YY1P25490 414 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 POLD1P28340 1107 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 PIGBQ92521 554 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 TRIM35Q9UPQ4 493 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 WNK3Q9BYP7 1800 aa9.17□□□□□ -0.94
SCAF11-211ENST00000547950 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-211ENST00000547950 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
SCAF11-211ENST00000547950 SMARCC1Q92922 1105 aaPredicted RBP9.16□□□□□ -0.94
SCAF11-211ENST00000547950 TMEM106CQ9BVX2 250 aa9.16□□□□□ -0.94
SCAF11-211ENST00000547950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.944e-10■■■■■ 28.3
SCAF11-211ENST00000547950 NHSQ6T4R5 1651 aa9.16□□□□□ -0.94
SCAF11-211ENST00000547950 POTEFA5A3E0 1075 aa9.15□□□□□ -0.94
SCAF11-211ENST00000547950 PHKG2P15735 406 aa9.15□□□□□ -0.94
SCAF11-211ENST00000547950 CNGB1Q14028 1251 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-211ENST00000547950 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.94
SCAF11-211ENST00000547950 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
SCAF11-211ENST00000547950 TMOD3Q9NYL9 352 aa9.15□□□□□ -0.94
SCAF11-211ENST00000547950 PALLDQ8WX93 1383 aa9.14□□□□□ -0.95
SCAF11-211ENST00000547950 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
SCAF11-211ENST00000547950 PLEKHO1Q53GL0 409 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-211ENST00000547950 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
SCAF11-211ENST00000547950 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
SCAF11-211ENST00000547950 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-211ENST00000547950 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
SCAF11-211ENST00000547950 FAM208AQ9UK61 1670 aaKnown RBP9.13□□□□□ -0.95
SCAF11-211ENST00000547950 KIF7Q2M1P5 1343 aa9.13□□□□□ -0.95
SCAF11-211ENST00000547950 GPR162Q16538 588 aa9.13□□□□□ -0.95
SCAF11-211ENST00000547950 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
SCAF11-211ENST00000547950 AK7Q96M32 723 aa9.13□□□□□ -0.95
SCAF11-211ENST00000547950 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
SCAF11-211ENST00000547950 COLQQ9Y215 455 aaPredicted RBP9.13□□□□□ -0.95
SCAF11-211ENST00000547950 IGSF1Q8N6C5 1336 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 LOC102724428A0A0B4J2F2 783 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 PHF14O94880 888 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 SIK1P57059 783 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-211ENST00000547950 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
SCAF11-211ENST00000547950 SULT6B1Q6IMI4 303 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 ZNF530Q6P9A1 599 aaPredicted RBP9.12□□□□□ -0.95
SCAF11-211ENST00000547950 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 SCUBE2Q9NQ36 999 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 ATG3Q9NT62 314 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 BTAF1O14981 1849 aa9.12□□□□□ -0.95
SCAF11-211ENST00000547950 MYOM1P52179 1685 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 IL13P35225 146 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 MTHFSP49914 203 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 CABP4P57796 275 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 GSE1Q14687 1217 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 AMOTQ4VCS5 1084 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 FLAD1Q8NFF5 587 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 CASZ1Q86V15 1759 aa9.11□□□□□ -0.95
SCAF11-211ENST00000547950 RGPD2P0DJD1 1756 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
SCAF11-211ENST00000547950 ERVV-2B6SEH9 535 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 PER1O15534 1290 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-211ENST00000547950 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
SCAF11-211ENST00000547950 ITPK1Q13572 414 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 C1orf141Q5JVX7 400 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 PLSCR2Q9NRY7 297 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 NCAPD2Q15021 1401 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 KIF20BQ96Q89 1820 aa9.1□□□□□ -0.95
SCAF11-211ENST00000547950 PAPPAQ13219 1627 aa9.09□□□□□ -0.95
SCAF11-211ENST00000547950 GNPATO15228 680 aa9.09□□□□□ -0.95
SCAF11-211ENST00000547950 HMOX1P09601 288 aa9.09□□□□□ -0.95
SCAF11-211ENST00000547950 KAT6BQ8WYB5 2073 aa9.09□□□□□ -0.95
SCAF11-211ENST00000547950 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
SCAF11-211ENST00000547950 IER5LQ5T953 404 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms