RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 PDZRN3Q9UPQ7 1066 aa21.37■■□□□ 1.01
LETMD1-210ENST00000547555 XRCC6P12956 609 aaKnown RBP eCLIP21.37■■□□□ 1.01
LETMD1-210ENST00000547555 BARGINQ6ZT62 677 aa21.37■■□□□ 1.01
LETMD1-210ENST00000547555 CCDC9Q9Y3X0 531 aaKnown RBP21.37■■□□□ 1.01
LETMD1-210ENST00000547555 RRP9O43818 475 aaKnown RBP21.36■■□□□ 1.01
LETMD1-210ENST00000547555 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
LETMD1-210ENST00000547555 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
LETMD1-210ENST00000547555 PLEKHG2Q9H7P9 1386 aa21.36■■□□□ 1.01
LETMD1-210ENST00000547555 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
LETMD1-210ENST00000547555 MEGF6O75095 1541 aa21.35■■□□□ 1.01
LETMD1-210ENST00000547555 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
LETMD1-210ENST00000547555 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
LETMD1-210ENST00000547555 PANK1Q8TE04 598 aa21.35■■□□□ 1.01
LETMD1-210ENST00000547555 KIF16BQ96L93 1317 aa21.35■■□□□ 1.01
LETMD1-210ENST00000547555 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
LETMD1-210ENST00000547555 SLKQ9H2G2 1235 aaPredicted RBP21.34■■□□□ 1.01
LETMD1-210ENST00000547555 RRAGDQ9NQL2 400 aaPredicted RBP21.34■■□□□ 1.01
LETMD1-210ENST00000547555 LRRC37A3O60309 1634 aa21.34■■□□□ 1.01
LETMD1-210ENST00000547555 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
LETMD1-210ENST00000547555 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
LETMD1-210ENST00000547555 C22orf23Q9BZE7 217 aa21.34■■□□□ 1.01
LETMD1-210ENST00000547555 OVOS2A0A0G2JMS6 1433 aa21.33■■□□□ 1.01
LETMD1-210ENST00000547555 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1
LETMD1-210ENST00000547555 U2AF1L5P0DN76 240 aaPredicted RBP21.33■■□□□ 1
LETMD1-210ENST00000547555 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1
LETMD1-210ENST00000547555 U2AF1Q01081 240 aaKnown RBP eCLIP21.33■■□□□ 1
LETMD1-210ENST00000547555 ZKSCAN2Q63HK3 967 aa21.33■■□□□ 1
LETMD1-210ENST00000547555 PCDHB15Q9Y5E8 787 aa21.33■■□□□ 1
LETMD1-210ENST00000547555 IL16Q14005 1332 aa21.32■■□□□ 1
LETMD1-210ENST00000547555 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
LETMD1-210ENST00000547555 TRAK2O60296 914 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 IL2RBP14784 551 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 CFAP44Q96MT7 982 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 CDCA7Q9BWT1 371 aaPredicted RBP21.31■■□□□ 1
LETMD1-210ENST00000547555 CHMP4BQ9H444 224 aaKnown RBP21.31■■□□□ 1
LETMD1-210ENST00000547555 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 HMOX1P09601 288 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
LETMD1-210ENST00000547555 HSCBQ8IWL3 235 aa21.31■■□□□ 1
LETMD1-210ENST00000547555 FCHSD2O94868 740 aa21.3■■□□□ 1
LETMD1-210ENST00000547555 FAM98CQ17RN3 349 aaKnown RBP21.29■■□□□ 1
LETMD1-210ENST00000547555 SMC5Q8IY18 1101 aa21.29■■□□□ 1
LETMD1-210ENST00000547555 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
LETMD1-210ENST00000547555 IBTKQ9P2D0 1353 aaPredicted RBP21.29■■□□□ 1
LETMD1-210ENST00000547555 TNS2Q63HR2 1409 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 RXRBP28702 533 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 DDIT3P35638 169 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 GBP4Q96PP9 640 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 BRWD3Q6RI45 1802 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 DZIP1LQ8IYY4 767 aaKnown RBP21.28■■□□□ 1
LETMD1-210ENST00000547555 ZNF428Q96B54 188 aa21.28■■□□□ 1
LETMD1-210ENST00000547555 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
LETMD1-210ENST00000547555 RGS12O14924 1447 aa21.26■□□□□ 0.99
LETMD1-210ENST00000547555 PRKAR2BP31323 418 aa21.25■□□□□ 0.99
LETMD1-210ENST00000547555 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
LETMD1-210ENST00000547555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.25■□□□□ 0.99
LETMD1-210ENST00000547555 CLEC17AQ6ZS10 378 aa21.24■□□□□ 0.99
LETMD1-210ENST00000547555 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
LETMD1-210ENST00000547555 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
LETMD1-210ENST00000547555 TPM2P07951 284 aa21.24■□□□□ 0.99
LETMD1-210ENST00000547555 TERF1P54274 439 aa21.24■□□□□ 0.99
LETMD1-210ENST00000547555 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
LETMD1-210ENST00000547555 RLBP1P12271 317 aa21.22■□□□□ 0.99
LETMD1-210ENST00000547555 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
LETMD1-210ENST00000547555 SEPT12Q8IYM1 358 aa21.22■□□□□ 0.99
LETMD1-210ENST00000547555 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
LETMD1-210ENST00000547555 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
LETMD1-210ENST00000547555 DDB1Q16531 1140 aa21.21■□□□□ 0.99
LETMD1-210ENST00000547555 AMOTQ4VCS5 1084 aa21.21■□□□□ 0.99
LETMD1-210ENST00000547555 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
LETMD1-210ENST00000547555 ESPNB1AK53 854 aa21.2■□□□□ 0.98
LETMD1-210ENST00000547555 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
LETMD1-210ENST00000547555 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
LETMD1-210ENST00000547555 SPG7Q9UQ90 795 aa21.2■□□□□ 0.98
LETMD1-210ENST00000547555 EXOC5O00471 708 aa21.19■□□□□ 0.98
LETMD1-210ENST00000547555 A0A0G2JS52 829 aa21.18■□□□□ 0.98
LETMD1-210ENST00000547555 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
LETMD1-210ENST00000547555 PCDH11XQ9BZA7 1347 aa21.18■□□□□ 0.98
LETMD1-210ENST00000547555 PCDH11YQ9BZA8 1340 aa21.18■□□□□ 0.98
LETMD1-210ENST00000547555 ADAMTS7Q9UKP4 1686 aa21.17■□□□□ 0.98
LETMD1-210ENST00000547555 HSP90AA2PQ14568 343 aaPredicted RBP21.17■□□□□ 0.98
LETMD1-210ENST00000547555 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
LETMD1-210ENST00000547555 MTHFSDQ2M296 383 aaKnown RBP21.17■□□□□ 0.98
LETMD1-210ENST00000547555 HS1BP3Q53T59 392 aa21.17■□□□□ 0.98
LETMD1-210ENST00000547555 CYP27B1O15528 508 aa21.16■□□□□ 0.98
LETMD1-210ENST00000547555 BMP2KLQ5H9B9 411 aa21.16■□□□□ 0.98
LETMD1-210ENST00000547555 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
LETMD1-210ENST00000547555 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
LETMD1-210ENST00000547555 TRIM44Q96DX7 344 aaPredicted RBP21.16■□□□□ 0.98
LETMD1-210ENST00000547555 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
LETMD1-210ENST00000547555 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
LETMD1-210ENST00000547555 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
LETMD1-210ENST00000547555 GOLGA6L22H0YM25 854 aa21.15■□□□□ 0.98
LETMD1-210ENST00000547555 ZNF530Q6P9A1 599 aaPredicted RBP21.15■□□□□ 0.98
LETMD1-210ENST00000547555 BCL9O00512 1426 aa21.14■□□□□ 0.97
LETMD1-210ENST00000547555 NUCB1Q02818 461 aa21.14■□□□□ 0.97
LETMD1-210ENST00000547555 TOGARAM1Q9Y4F4 1720 aa21.14■□□□□ 0.97
LETMD1-210ENST00000547555 PHKG2P15735 406 aa21.13■□□□□ 0.97
LETMD1-210ENST00000547555 MARCH10Q8NA82 808 aaPredicted RBP21.13■□□□□ 0.97
LETMD1-210ENST00000547555 GCC1Q96CN9 775 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms