RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
PRKD1-206ENST00000547441 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
PRKD1-206ENST00000547441 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
PRKD1-206ENST00000547441 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
PRKD1-206ENST00000547441 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
PRKD1-206ENST00000547441 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
PRKD1-206ENST00000547441 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
PRKD1-206ENST00000547441 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
PRKD1-206ENST00000547441 AK7Q96M32 723 aa13.4□□□□□ -0.26
PRKD1-206ENST00000547441 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
PRKD1-206ENST00000547441 ITGB4P16144 1822 aa13.4□□□□□ -0.26
PRKD1-206ENST00000547441 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
PRKD1-206ENST00000547441 AMIGO3Q86WK7 504 aa13.39□□□□□ -0.27
PRKD1-206ENST00000547441 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
PRKD1-206ENST00000547441 KIF3CO14782 793 aa13.38□□□□□ -0.27
PRKD1-206ENST00000547441 WWC3Q9ULE0 1092 aa13.38□□□□□ -0.27
PRKD1-206ENST00000547441 PKD1L3Q7Z443 1732 aa13.38□□□□□ -0.27
PRKD1-206ENST00000547441 INSRP06213 1382 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
PRKD1-206ENST00000547441 CYP27B1O15528 508 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 PHF14O94880 888 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 PCNTO95613 3336 aa13.37□□□□□ -0.27
PRKD1-206ENST00000547441 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
PRKD1-206ENST00000547441 SSFA2P28290 1259 aa13.36□□□□□ -0.27
PRKD1-206ENST00000547441 MIER1Q8N108 512 aa13.36□□□□□ -0.27
PRKD1-206ENST00000547441 FLT4P35916 1363 aa13.35□□□□□ -0.27
PRKD1-206ENST00000547441 APLP1P51693 650 aa13.35□□□□□ -0.27
PRKD1-206ENST00000547441 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
PRKD1-206ENST00000547441 SMIM5Q71RC9 77 aa13.35□□□□□ -0.27
PRKD1-206ENST00000547441 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
PRKD1-206ENST00000547441 PIGBQ92521 554 aa13.34□□□□□ -0.27
PRKD1-206ENST00000547441 PANK3Q9H999 370 aa13.34□□□□□ -0.27
PRKD1-206ENST00000547441 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
PRKD1-206ENST00000547441 KIAA1551Q9HCM1 1747 aa13.33□□□□□ -0.27
PRKD1-206ENST00000547441 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
PRKD1-206ENST00000547441 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
PRKD1-206ENST00000547441 SIK1P57059 783 aa13.33□□□□□ -0.28
PRKD1-206ENST00000547441 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
PRKD1-206ENST00000547441 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
PRKD1-206ENST00000547441 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
PRKD1-206ENST00000547441 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
PRKD1-206ENST00000547441 GNPATO15228 680 aa13.31□□□□□ -0.28
PRKD1-206ENST00000547441 TOMM70O94826 608 aa13.31□□□□□ -0.28
PRKD1-206ENST00000547441 DNAJC5GQ8N7S2 189 aa13.31□□□□□ -0.28
PRKD1-206ENST00000547441 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
PRKD1-206ENST00000547441 MMP10P09238 476 aa13.3□□□□□ -0.28
PRKD1-206ENST00000547441 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
PRKD1-206ENST00000547441 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
PRKD1-206ENST00000547441 TGFB2P61812 414 aa13.29□□□□□ -0.28
PRKD1-206ENST00000547441 ITPK1Q13572 414 aa13.29□□□□□ -0.28
PRKD1-206ENST00000547441 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
PRKD1-206ENST00000547441 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
PRKD1-206ENST00000547441 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
PRKD1-206ENST00000547441 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
PRKD1-206ENST00000547441 WDR90Q96KV7 1748 aa13.28□□□□□ -0.28
PRKD1-206ENST00000547441 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
PRKD1-206ENST00000547441 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
PRKD1-206ENST00000547441 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
PRKD1-206ENST00000547441 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
PRKD1-206ENST00000547441 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
PRKD1-206ENST00000547441 NMRK2Q9NPI5 230 aa13.27□□□□□ -0.29
PRKD1-206ENST00000547441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKD1-206ENST00000547441 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
PRKD1-206ENST00000547441 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
PRKD1-206ENST00000547441 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
PRKD1-206ENST00000547441 KDRP35968 1356 aa13.26□□□□□ -0.29
PRKD1-206ENST00000547441 ZNF831Q5JPB2 1677 aa13.26□□□□□ -0.29
PRKD1-206ENST00000547441 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
PRKD1-206ENST00000547441 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
PRKD1-206ENST00000547441 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
PRKD1-206ENST00000547441 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
PRKD1-206ENST00000547441 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
PRKD1-206ENST00000547441 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
PRKD1-206ENST00000547441 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
PRKD1-206ENST00000547441 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
PRKD1-206ENST00000547441 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
PRKD1-206ENST00000547441 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
PRKD1-206ENST00000547441 PHKG2P15735 406 aa13.24□□□□□ -0.29
PRKD1-206ENST00000547441 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
PRKD1-206ENST00000547441 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
PRKD1-206ENST00000547441 IFNL2Q8IZJ0 200 aa13.24□□□□□ -0.29
PRKD1-206ENST00000547441 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
PRKD1-206ENST00000547441 COL5A3P25940 1745 aaPredicted RBP13.24□□□□□ -0.29
PRKD1-206ENST00000547441 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
PRKD1-206ENST00000547441 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
PRKD1-206ENST00000547441 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
PRKD1-206ENST00000547441 FCHSD2O94868 740 aa13.23□□□□□ -0.29
PRKD1-206ENST00000547441 DPEP1P16444 411 aa13.23□□□□□ -0.29
PRKD1-206ENST00000547441 EYA1Q99502 592 aa13.23□□□□□ -0.29
PRKD1-206ENST00000547441 GYS1P13807 737 aa13.22□□□□□ -0.29
PRKD1-206ENST00000547441 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
PRKD1-206ENST00000547441 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
PRKD1-206ENST00000547441 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
PRKD1-206ENST00000547441 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
PRKD1-206ENST00000547441 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
PRKD1-206ENST00000547441 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
PRKD1-206ENST00000547441 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms