RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 TATP17735 454 aaPredicted RBP8.17□□□□□ -1.1
PFDN5-205ENST00000547228 DALRD3Q5D0E6 543 aaKnown RBP8.17□□□□□ -1.1
PFDN5-205ENST00000547228 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 AIDAQ96BJ3 306 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 TERF2IPQ9NYB0 399 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 NFAT5O94916 1531 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 GNPATO15228 680 aa8.16□□□□□ -1.1
PFDN5-205ENST00000547228 BRPF1P55201 1214 aaPredicted RBP8.16□□□□□ -1.1
PFDN5-205ENST00000547228 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
PFDN5-205ENST00000547228 CHMP4AQ9BY43 222 aa8.16□□□□□ -1.1
PFDN5-205ENST00000547228 PCDH11XQ9BZA7 1347 aa8.16□□□□□ -1.1
PFDN5-205ENST00000547228 PCDH11YQ9BZA8 1340 aa8.16□□□□□ -1.1
PFDN5-205ENST00000547228 WNK3Q9BYP7 1800 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 PIK3C2AO00443 1686 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 C10orf71Q711Q0 1435 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 RAB3GAP2Q9H2M9 1393 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
PFDN5-205ENST00000547228 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 CTCFP49711 727 aaPredicted RBP8.15□□□□□ -1.1
PFDN5-205ENST00000547228 SIK1P57059 783 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 SMIM5Q71RC9 77 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 COG3Q96JB2 828 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 ARID3AQ99856 593 aa8.15□□□□□ -1.1
PFDN5-205ENST00000547228 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
PFDN5-205ENST00000547228 GLTPD2A6NH11 291 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 HOXC9P31274 260 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 RFC4P35249 363 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
PFDN5-205ENST00000547228 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 AMIGO3Q86WK7 504 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 CREBZFQ9NS37 354 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 WDR90Q96KV7 1748 aa8.14□□□□□ -1.11
PFDN5-205ENST00000547228 KCNA3P22001 575 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 PIGBQ92521 554 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
PFDN5-205ENST00000547228 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
PFDN5-205ENST00000547228 FOXN1O15353 648 aa8.12□□□□□ -1.11
PFDN5-205ENST00000547228 LMNB1P20700 586 aa8.12□□□□□ -1.11
PFDN5-205ENST00000547228 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
PFDN5-205ENST00000547228 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
PFDN5-205ENST00000547228 QRICH2Q9H0J4 1663 aa8.11□□□□□ -1.11
PFDN5-205ENST00000547228 CICQ96RK0 1608 aaPredicted RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 MAP3K19Q56UN5 1328 aa8.11□□□□□ -1.11
PFDN5-205ENST00000547228 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 ARHGEF1Q92888 912 aaKnown RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 ABHD8Q96I13 439 aa8.11□□□□□ -1.11
PFDN5-205ENST00000547228 SLC12A5Q9H2X9 1139 aa8.11□□□□□ -1.11
PFDN5-205ENST00000547228 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 SPG7Q9UQ90 795 aa8.11□□□□□ -1.11
PFDN5-205ENST00000547228 EDC4Q6P2E9 1401 aaKnown RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 SMG6Q86US8 1419 aaKnown RBP8.11□□□□□ -1.11
PFDN5-205ENST00000547228 CYP27B1O15528 508 aa8.1□□□□□ -1.11
PFDN5-205ENST00000547228 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
PFDN5-205ENST00000547228 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
PFDN5-205ENST00000547228 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
PFDN5-205ENST00000547228 LY75O60449 1722 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 CD163L1Q9NR16 1453 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 RPS6KA4O75676 772 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 GYS1P13807 737 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 LBX1P52954 281 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 ITPK1Q13572 414 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 CHADLQ6NUI6 762 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 SAMD1Q6SPF0 538 aaPredicted RBP8.09□□□□□ -1.11
PFDN5-205ENST00000547228 PUS7Q96PZ0 661 aaKnown RBP8.09□□□□□ -1.11
PFDN5-205ENST00000547228 ASAP1Q9ULH1 1129 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 RGPD5Q99666 1765 aa8.09□□□□□ -1.11
PFDN5-205ENST00000547228 ROCK2O75116 1388 aaKnown RBP8.09□□□□□ -1.12
PFDN5-205ENST00000547228 MEGF6O75095 1541 aa8.08□□□□□ -1.12
PFDN5-205ENST00000547228 CCDC85CA6NKD9 419 aa8.08□□□□□ -1.12
PFDN5-205ENST00000547228 RGS19P49795 217 aa8.08□□□□□ -1.12
PFDN5-205ENST00000547228 KIAA1210Q9ULL0 1709 aa8.08□□□□□ -1.12
PFDN5-205ENST00000547228 ECM2O94769 699 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-205ENST00000547228 FBLN1P23142 703 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 CHRNA5P30532 468 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 MAP2K1Q02750 393 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-205ENST00000547228 L3MBTL2Q969R5 705 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
PFDN5-205ENST00000547228 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 WBP1LQ9NX94 342 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 RTL1A6NKG5 1358 aa8.07□□□□□ -1.12
PFDN5-205ENST00000547228 C4BP0C0L5 1744 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 VEGFBP49765 207 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 RRS1Q15050 365 aaKnown RBP8.06□□□□□ -1.12
PFDN5-205ENST00000547228 IFNL2Q8IZJ0 200 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 TTLL6Q8N841 843 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 NECTIN2Q92692 538 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 ATG3Q9NT62 314 aa8.06□□□□□ -1.12
PFDN5-205ENST00000547228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms