RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
BEST3-208ENST00000547208 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
BEST3-208ENST00000547208 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
BEST3-208ENST00000547208 CICQ96RK0 1608 aaPredicted RBP14.04□□□□□ -0.16
BEST3-208ENST00000547208 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
BEST3-208ENST00000547208 TMOD3Q9NYL9 352 aa14.03□□□□□ -0.16
BEST3-208ENST00000547208 ASAP1Q9ULH1 1129 aa14.03□□□□□ -0.16
BEST3-208ENST00000547208 MAP3K5Q99683 1374 aa14.03□□□□□ -0.16
BEST3-208ENST00000547208 MYH14Q7Z406 1995 aaKnown RBP14.03□□□□□ -0.16
BEST3-208ENST00000547208 TJP1Q07157 1748 aa14.02□□□□□ -0.16
BEST3-208ENST00000547208 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.17
BEST3-208ENST00000547208 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
BEST3-208ENST00000547208 AMIGO3Q86WK7 504 aa14.02□□□□□ -0.17
BEST3-208ENST00000547208 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
BEST3-208ENST00000547208 ATG3Q9NT62 314 aa14.02□□□□□ -0.17
BEST3-208ENST00000547208 LOC102724428A0A0B4J2F2 783 aa14.01□□□□□ -0.17
BEST3-208ENST00000547208 SIK1P57059 783 aa14.01□□□□□ -0.17
BEST3-208ENST00000547208 ZNF530Q6P9A1 599 aaPredicted RBP14.01□□□□□ -0.17
BEST3-208ENST00000547208 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
BEST3-208ENST00000547208 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
BEST3-208ENST00000547208 ARXQ96QS3 562 aa14.01□□□□□ -0.17
BEST3-208ENST00000547208 ERVV-2B6SEH9 535 aa14□□□□□ -0.17
BEST3-208ENST00000547208 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
BEST3-208ENST00000547208 ITPK1Q13572 414 aa14□□□□□ -0.17
BEST3-208ENST00000547208 LINC00116Q8NCU8 138 aa14□□□□□ -0.17
BEST3-208ENST00000547208 SIPA1L3O60292 1781 aaPredicted RBP14□□□□□ -0.17
BEST3-208ENST00000547208 C4AP0C0L4 1744 aa14□□□□□ -0.17
BEST3-208ENST00000547208 MRC1P22897 1456 aa13.99□□□□□ -0.17
BEST3-208ENST00000547208 CEP350Q5VT06 3117 aa13.99□□□□□ -0.17
BEST3-208ENST00000547208 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
BEST3-208ENST00000547208 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
BEST3-208ENST00000547208 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
BEST3-208ENST00000547208 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
BEST3-208ENST00000547208 HMOX1P09601 288 aa13.97□□□□□ -0.17
BEST3-208ENST00000547208 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
BEST3-208ENST00000547208 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
BEST3-208ENST00000547208 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
BEST3-208ENST00000547208 POLD1P28340 1107 aa13.96□□□□□ -0.17
BEST3-208ENST00000547208 GPR162Q16538 588 aa13.96□□□□□ -0.17
BEST3-208ENST00000547208 C1orf141Q5JVX7 400 aa13.96□□□□□ -0.17
BEST3-208ENST00000547208 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
BEST3-208ENST00000547208 AK7Q96M32 723 aa13.96□□□□□ -0.17
BEST3-208ENST00000547208 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
BEST3-208ENST00000547208 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
BEST3-208ENST00000547208 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
BEST3-208ENST00000547208 CABP4P57796 275 aa13.95□□□□□ -0.18
BEST3-208ENST00000547208 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
BEST3-208ENST00000547208 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
BEST3-208ENST00000547208 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
BEST3-208ENST00000547208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
BEST3-208ENST00000547208 SSFA2P28290 1259 aa13.94□□□□□ -0.18
BEST3-208ENST00000547208 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
BEST3-208ENST00000547208 NFATC2IPQ8NCF5 419 aa13.94□□□□□ -0.18
BEST3-208ENST00000547208 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
BEST3-208ENST00000547208 PHF14O94880 888 aa13.93□□□□□ -0.18
BEST3-208ENST00000547208 MTHFSDQ2M296 383 aaKnown RBP13.93□□□□□ -0.18
BEST3-208ENST00000547208 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
BEST3-208ENST00000547208 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
BEST3-208ENST00000547208 GNPATO15228 680 aa13.92□□□□□ -0.18
BEST3-208ENST00000547208 CNTNAP4Q9C0A0 1308 aa13.91□□□□□ -0.18
BEST3-208ENST00000547208 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
BEST3-208ENST00000547208 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
BEST3-208ENST00000547208 DLG5Q8TDM6 1919 aa13.91□□□□□ -0.18
BEST3-208ENST00000547208 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
BEST3-208ENST00000547208 GIGYF1O75420 1035 aaPredicted RBP13.9□□□□□ -0.18
BEST3-208ENST00000547208 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
BEST3-208ENST00000547208 RC3H1Q5TC82 1133 aaKnown RBP13.9□□□□□ -0.18
BEST3-208ENST00000547208 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
BEST3-208ENST00000547208 BRCA1P38398 1863 aaKnown RBP13.89□□□□□ -0.19
BEST3-208ENST00000547208 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
BEST3-208ENST00000547208 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
BEST3-208ENST00000547208 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
BEST3-208ENST00000547208 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
BEST3-208ENST00000547208 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
BEST3-208ENST00000547208 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
BEST3-208ENST00000547208 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
BEST3-208ENST00000547208 RPS6KA4O75676 772 aa13.86□□□□□ -0.19
BEST3-208ENST00000547208 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
BEST3-208ENST00000547208 SLC39A6Q13433 755 aa13.86□□□□□ -0.19
BEST3-208ENST00000547208 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
BEST3-208ENST00000547208 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
BEST3-208ENST00000547208 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
BEST3-208ENST00000547208 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
BEST3-208ENST00000547208 INTS5Q6P9B9 1019 aaKnown RBP13.85□□□□□ -0.19
BEST3-208ENST00000547208 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
BEST3-208ENST00000547208 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
BEST3-208ENST00000547208 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
BEST3-208ENST00000547208 AFDNP55196 1824 aaKnown RBP13.85□□□□□ -0.19
BEST3-208ENST00000547208 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
BEST3-208ENST00000547208 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
BEST3-208ENST00000547208 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
BEST3-208ENST00000547208 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
BEST3-208ENST00000547208 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
BEST3-208ENST00000547208 MMP10P09238 476 aa13.83□□□□□ -0.2
BEST3-208ENST00000547208 GYS1P13807 737 aa13.83□□□□□ -0.2
BEST3-208ENST00000547208 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
BEST3-208ENST00000547208 CYP19A1P11511 503 aaPredicted RBP13.82□□□□□ -0.2
BEST3-208ENST00000547208 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
BEST3-208ENST00000547208 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
BEST3-208ENST00000547208 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms