RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
NPAS3-205ENST00000547068 NSD2O96028 1365 aa12.98□□□□□ -0.33
NPAS3-205ENST00000547068 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
NPAS3-205ENST00000547068 ARHGAP45Q92619 1136 aa12.98□□□□□ -0.33
NPAS3-205ENST00000547068 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
NPAS3-205ENST00000547068 SPTLC3Q9NUV7 552 aa12.98□□□□□ -0.33
NPAS3-205ENST00000547068 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
NPAS3-205ENST00000547068 ADCY5O95622 1261 aa12.97□□□□□ -0.33
NPAS3-205ENST00000547068 BRD1O95696 1058 aa12.97□□□□□ -0.33
NPAS3-205ENST00000547068 PDE4CQ08493 712 aa12.97□□□□□ -0.33
NPAS3-205ENST00000547068 REC8O95072 547 aa12.96□□□□□ -0.33
NPAS3-205ENST00000547068 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPAS3-205ENST00000547068 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
NPAS3-205ENST00000547068 TAF3Q5VWG9 929 aa12.96□□□□□ -0.33
NPAS3-205ENST00000547068 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
NPAS3-205ENST00000547068 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.33
NPAS3-205ENST00000547068 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
NPAS3-205ENST00000547068 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.34
NPAS3-205ENST00000547068 IGSF3O75054 1194 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 SDSP20132 328 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 STRCP1A6NGW2 1772 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 C19orf44Q9H6X5 657 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 DCTPP1Q9H773 170 aa12.95□□□□□ -0.34
NPAS3-205ENST00000547068 NEK4P51957 841 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 ABCC4O15439 1325 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
NPAS3-205ENST00000547068 VAMP4O75379 141 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 ANKRD7Q92527 254 aa12.94□□□□□ -0.34
NPAS3-205ENST00000547068 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
NPAS3-205ENST00000547068 ADGRL3Q9HAR2 1447 aa12.93□□□□□ -0.34
NPAS3-205ENST00000547068 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
NPAS3-205ENST00000547068 FEZ1Q99689 392 aa12.93□□□□□ -0.34
NPAS3-205ENST00000547068 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 ERC2O15083 957 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 ATF3P18847 181 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 MCM2P49736 904 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
NPAS3-205ENST00000547068 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
NPAS3-205ENST00000547068 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
NPAS3-205ENST00000547068 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
NPAS3-205ENST00000547068 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
NPAS3-205ENST00000547068 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 TSPYL6Q8N831 410 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 MSH6P52701 1360 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 CTIFO43310 598 aaKnown RBP12.91□□□□□ -0.34
NPAS3-205ENST00000547068 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 GGNBP2Q9H3C7 697 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
NPAS3-205ENST00000547068 NALCNQ8IZF0 1738 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
NPAS3-205ENST00000547068 KDM4AO75164 1064 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 CUL4AQ13619 759 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-205ENST00000547068 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
NPAS3-205ENST00000547068 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
NPAS3-205ENST00000547068 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
NPAS3-205ENST00000547068 APBB1O00213 710 aa12.89□□□□□ -0.35
NPAS3-205ENST00000547068 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
NPAS3-205ENST00000547068 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
NPAS3-205ENST00000547068 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
NPAS3-205ENST00000547068 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
NPAS3-205ENST00000547068 TPM3P06753 285 aa12.88□□□□□ -0.35
NPAS3-205ENST00000547068 MX1P20591 662 aa12.88□□□□□ -0.35
NPAS3-205ENST00000547068 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-205ENST00000547068 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
NPAS3-205ENST00000547068 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
NPAS3-205ENST00000547068 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
NPAS3-205ENST00000547068 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 FCHSD2O94868 740 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 ANKRD44Q8N8A2 993 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 DCCP43146 1447 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 PRKAR2BP31323 418 aa12.87□□□□□ -0.35
NPAS3-205ENST00000547068 GABPB1Q06547 395 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-205ENST00000547068 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-205ENST00000547068 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
NPAS3-205ENST00000547068 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
NPAS3-205ENST00000547068 TCHHQ07283 1943 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 GOLGA6L6A8MZA4 724 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 GNAI1P63096 354 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 NCBP1Q09161 790 aaKnown RBP12.86□□□□□ -0.35
NPAS3-205ENST00000547068 ATP7BP35670 1465 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
NPAS3-205ENST00000547068 MCCP23508 829 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms