RNA–Protein interactions for RNA: ENST00000547029.5

LETMD1-207, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-207ENST00000547029 TMF1P82094 1093 aa8.21□□□□□ -1.1
LETMD1-207ENST00000547029 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
LETMD1-207ENST00000547029 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
LETMD1-207ENST00000547029 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.1
LETMD1-207ENST00000547029 GYS1P13807 737 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 PRELPP51888 382 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 TGFB2P61812 414 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
LETMD1-207ENST00000547029 CGNL1Q0VF96 1302 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
LETMD1-207ENST00000547029 PXDNLA1KZ92 1463 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 NLGN1Q8N2Q7 840 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 EYA1Q99502 592 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
LETMD1-207ENST00000547029 CARD14Q9BXL6 1004 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 TMOD3Q9NYL9 352 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 RNF181Q9P0P0 153 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 BTAF1O14981 1849 aa8.19□□□□□ -1.1
LETMD1-207ENST00000547029 DDR1Q08345 913 aa8.18□□□□□ -1.1
LETMD1-207ENST00000547029 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
LETMD1-207ENST00000547029 C16orf71Q8IYS4 520 aaPredicted RBP8.18□□□□□ -1.1
LETMD1-207ENST00000547029 PUS7Q96PZ0 661 aaKnown RBP8.18□□□□□ -1.1
LETMD1-207ENST00000547029 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
LETMD1-207ENST00000547029 HSPA1AP0DMV8 641 aaKnown RBP8.17□□□□□ -1.1
LETMD1-207ENST00000547029 HSPA1BP0DMV9 641 aaKnown RBP8.17□□□□□ -1.1
LETMD1-207ENST00000547029 PHKG2P15735 406 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 RASSF7Q02833 373 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 FSTL1Q12841 308 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 DALRD3Q5D0E6 543 aaKnown RBP8.17□□□□□ -1.1
LETMD1-207ENST00000547029 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 PIM2Q9P1W9 311 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 INSRP06213 1382 aa8.17□□□□□ -1.1
LETMD1-207ENST00000547029 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
LETMD1-207ENST00000547029 RPS6KA4O75676 772 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 RFC4P35249 363 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 RGPD5Q99666 1765 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 NSD3Q9BZ95 1437 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 CCDC87Q9NVE4 849 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 PARP3Q9Y6F1 533 aa8.16□□□□□ -1.1
LETMD1-207ENST00000547029 CHD4Q14839 1912 aa8.15□□□□□ -1.1
LETMD1-207ENST00000547029 QRICH2Q9H0J4 1663 aa8.15□□□□□ -1.1
LETMD1-207ENST00000547029 POTECB2RU33 542 aa8.15□□□□□ -1.1
LETMD1-207ENST00000547029 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
LETMD1-207ENST00000547029 MAPK8IP2Q13387 824 aaPredicted RBP8.15□□□□□ -1.1
LETMD1-207ENST00000547029 IFNL2Q8IZJ0 200 aa8.15□□□□□ -1.1
LETMD1-207ENST00000547029 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-207ENST00000547029 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
LETMD1-207ENST00000547029 SMC1BQ8NDV3 1235 aa8.14□□□□□ -1.11
LETMD1-207ENST00000547029 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
LETMD1-207ENST00000547029 KIAA1210Q9ULL0 1709 aa8.14□□□□□ -1.11
LETMD1-207ENST00000547029 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 C10orf71Q711Q0 1435 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 RTL1A6NKG5 1358 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 AKAP12Q02952 1782 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 KDM2BQ8NHM5 1336 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 HMGB2P26583 209 aaKnown RBP8.13□□□□□ -1.11
LETMD1-207ENST00000547029 TM4SF1P30408 202 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
LETMD1-207ENST00000547029 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
LETMD1-207ENST00000547029 FLT4P35916 1363 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 WASHC2AQ641Q2 1341 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 POLRMTO00411 1230 aaKnown RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 POTEIP0CG38 1075 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 POTEJP0CG39 1038 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 VEGFAP15692 232 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 CRKLP46109 303 aaKnown RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 ZNF219Q9P2Y4 722 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 KAT6BQ8WYB5 2073 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 COL24A1Q17RW2 1714 aa8.12□□□□□ -1.11
LETMD1-207ENST00000547029 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
LETMD1-207ENST00000547029 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
LETMD1-207ENST00000547029 ERVV-2B6SEH9 535 aa8.11□□□□□ -1.11
LETMD1-207ENST00000547029 CABP4P57796 275 aa8.11□□□□□ -1.11
LETMD1-207ENST00000547029 USPL1Q5W0Q7 1092 aa8.11□□□□□ -1.11
LETMD1-207ENST00000547029 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
LETMD1-207ENST00000547029 KDRP35968 1356 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 NFKBIEO00221 500 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 FOXN1O15353 648 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 NFIXQ14938 502 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 DNAJC10Q8IXB1 793 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
LETMD1-207ENST00000547029 USP42Q9H9J4 1324 aaKnown RBP8.09□□□□□ -1.11
LETMD1-207ENST00000547029 LMNB1P20700 586 aa8.09□□□□□ -1.11
LETMD1-207ENST00000547029 ZNF530Q6P9A1 599 aaPredicted RBP8.09□□□□□ -1.11
LETMD1-207ENST00000547029 TUBGCP6Q96RT7 1819 aa8.08□□□□□ -1.12
LETMD1-207ENST00000547029 CICQ96RK0 1608 aaPredicted RBP8.08□□□□□ -1.12
LETMD1-207ENST00000547029 MTHFSP49914 203 aa8.08□□□□□ -1.12
LETMD1-207ENST00000547029 SLC39A6Q13433 755 aa8.08□□□□□ -1.12
LETMD1-207ENST00000547029 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms