RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ATP6V1AP38606 617 aa19.56■□□□□ 0.72
COL2A1-209ENST00000546974 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
COL2A1-209ENST00000546974 SSFA2P28290 1259 aa19.55■□□□□ 0.72
COL2A1-209ENST00000546974 ITPK1Q13572 414 aa19.55■□□□□ 0.72
COL2A1-209ENST00000546974 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
COL2A1-209ENST00000546974 KDM6AO15550 1401 aaPredicted RBP19.54■□□□□ 0.72
COL2A1-209ENST00000546974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.54■□□□□ 0.72
COL2A1-209ENST00000546974 MTHFSP49914 203 aa19.54■□□□□ 0.72
COL2A1-209ENST00000546974 GPR162Q16538 588 aa19.54■□□□□ 0.72
COL2A1-209ENST00000546974 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
COL2A1-209ENST00000546974 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
COL2A1-209ENST00000546974 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
COL2A1-209ENST00000546974 PHF14O94880 888 aa19.52■□□□□ 0.72
COL2A1-209ENST00000546974 CABP4P57796 275 aa19.52■□□□□ 0.72
COL2A1-209ENST00000546974 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
COL2A1-209ENST00000546974 SMIM5Q71RC9 77 aa19.51■□□□□ 0.71
COL2A1-209ENST00000546974 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
COL2A1-209ENST00000546974 GNPATO15228 680 aa19.5■□□□□ 0.71
COL2A1-209ENST00000546974 SLC4A9Q96Q91 983 aa19.5■□□□□ 0.71
COL2A1-209ENST00000546974 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
COL2A1-209ENST00000546974 CD2APQ9Y5K6 639 aa19.5■□□□□ 0.71
COL2A1-209ENST00000546974 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
COL2A1-209ENST00000546974 AKAP4Q5JQC9 854 aa19.48■□□□□ 0.71
COL2A1-209ENST00000546974 RC3H1Q5TC82 1133 aaKnown RBP19.48■□□□□ 0.71
COL2A1-209ENST00000546974 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
COL2A1-209ENST00000546974 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
COL2A1-209ENST00000546974 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
COL2A1-209ENST00000546974 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
COL2A1-209ENST00000546974 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
COL2A1-209ENST00000546974 HMOX1P09601 288 aa19.46■□□□□ 0.71
COL2A1-209ENST00000546974 ZNF784Q8NCA9 323 aaPredicted RBP19.46■□□□□ 0.71
COL2A1-209ENST00000546974 CNTNAP4Q9C0A0 1308 aa19.46■□□□□ 0.71
COL2A1-209ENST00000546974 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
COL2A1-209ENST00000546974 MYH14Q7Z406 1995 aaKnown RBP19.45■□□□□ 0.7
COL2A1-209ENST00000546974 GRIN3BO60391 1043 aa19.45■□□□□ 0.7
COL2A1-209ENST00000546974 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
COL2A1-209ENST00000546974 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
COL2A1-209ENST00000546974 RPS6KA4O75676 772 aa19.43■□□□□ 0.7
COL2A1-209ENST00000546974 YBX3P16989 372 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL2A1-209ENST00000546974 ADRA2BP18089 450 aa19.43■□□□□ 0.7
COL2A1-209ENST00000546974 SLC52A2Q9HAB3 445 aa19.42■□□□□ 0.7
COL2A1-209ENST00000546974 LGR6Q9HBX8 967 aa19.42■□□□□ 0.7
COL2A1-209ENST00000546974 MTHFSDQ2M296 383 aaKnown RBP19.41■□□□□ 0.7
COL2A1-209ENST00000546974 NLGN1Q8N2Q7 840 aa19.41■□□□□ 0.7
COL2A1-209ENST00000546974 ARHGEF1Q92888 912 aaKnown RBP19.41■□□□□ 0.7
COL2A1-209ENST00000546974 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
COL2A1-209ENST00000546974 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
COL2A1-209ENST00000546974 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
COL2A1-209ENST00000546974 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
COL2A1-209ENST00000546974 MMP10P09238 476 aa19.39■□□□□ 0.69
COL2A1-209ENST00000546974 RFC4P35249 363 aa19.39■□□□□ 0.69
COL2A1-209ENST00000546974 MRC1P22897 1456 aa19.39■□□□□ 0.69
COL2A1-209ENST00000546974 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.69
COL2A1-209ENST00000546974 TJP1Q07157 1748 aa19.39■□□□□ 0.69
COL2A1-209ENST00000546974 CRKLP46109 303 aaKnown RBP19.38■□□□□ 0.69
COL2A1-209ENST00000546974 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
COL2A1-209ENST00000546974 GYS1P13807 737 aa19.37■□□□□ 0.69
COL2A1-209ENST00000546974 KIF13BQ9NQT8 1826 aa19.37■□□□□ 0.69
COL2A1-209ENST00000546974 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
COL2A1-209ENST00000546974 SLC39A6Q13433 755 aa19.34■□□□□ 0.69
COL2A1-209ENST00000546974 INTS5Q6P9B9 1019 aaKnown RBP19.34■□□□□ 0.69
COL2A1-209ENST00000546974 GAS2L2Q8NHY3 880 aa19.34■□□□□ 0.69
COL2A1-209ENST00000546974 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
COL2A1-209ENST00000546974 CFAP53Q96M91 514 aa19.33■□□□□ 0.68
COL2A1-209ENST00000546974 KCPQ6ZWJ8 1503 aa19.32■□□□□ 0.68
COL2A1-209ENST00000546974 TGFB2P61812 414 aa19.32■□□□□ 0.68
COL2A1-209ENST00000546974 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
COL2A1-209ENST00000546974 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
COL2A1-209ENST00000546974 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
COL2A1-209ENST00000546974 USP42Q9H9J4 1324 aaKnown RBP19.31■□□□□ 0.68
COL2A1-209ENST00000546974 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
COL2A1-209ENST00000546974 UBR2Q8IWV8 1755 aa19.3■□□□□ 0.68
COL2A1-209ENST00000546974 CYP19A1P11511 503 aaPredicted RBP19.3■□□□□ 0.68
COL2A1-209ENST00000546974 SRP68Q9UHB9 627 aaKnown RBP19.3■□□□□ 0.68
COL2A1-209ENST00000546974 C10orf71Q711Q0 1435 aa19.3■□□□□ 0.68
COL2A1-209ENST00000546974 KIAA1551Q9HCM1 1747 aa19.3■□□□□ 0.68
COL2A1-209ENST00000546974 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
COL2A1-209ENST00000546974 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
COL2A1-209ENST00000546974 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
COL2A1-209ENST00000546974 IL17REQ8NFR9 667 aa19.29■□□□□ 0.68
COL2A1-209ENST00000546974 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
COL2A1-209ENST00000546974 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
COL2A1-209ENST00000546974 TEFQ10587 303 aa19.28■□□□□ 0.68
COL2A1-209ENST00000546974 FKBP8Q14318 412 aa19.28■□□□□ 0.68
COL2A1-209ENST00000546974 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
COL2A1-209ENST00000546974 WWC3Q9ULE0 1092 aa19.28■□□□□ 0.68
COL2A1-209ENST00000546974 SIPA1L3O60292 1781 aaPredicted RBP19.28■□□□□ 0.68
COL2A1-209ENST00000546974 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.68
COL2A1-209ENST00000546974 A0A0G2JLW4 131 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 ZPR1O75312 459 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 PHACTR3Q96KR7 559 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
COL2A1-209ENST00000546974 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
COL2A1-209ENST00000546974 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
COL2A1-209ENST00000546974 COL15A1P39059 1388 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 CEMIPQ8WUJ3 1361 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 DPEP1P16444 411 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 TM4SF1P30408 202 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms